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A New Blood Collection Device Minimizes Cellular DNA Release During Sample Storage and Shipping When Compared to a Standard Device

BACKGROUND: Cell‐free DNA (cfDNA) circulating in blood is currently used for noninvasive diagnostic and prognostic tests. Minimizing background DNA is vital for detection of low abundance cfDNA. We investigated whether a new blood collection device could reduce background levels of genomic DNA (gDNA...

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Autores principales: Norton, Sheila E., Luna, Kristin K., Lechner, Joel M., Qin, Jianbing, Fernando, M. Rohan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3748785/
https://www.ncbi.nlm.nih.gov/pubmed/23852790
http://dx.doi.org/10.1002/jcla.21603
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author Norton, Sheila E.
Luna, Kristin K.
Lechner, Joel M.
Qin, Jianbing
Fernando, M. Rohan
author_facet Norton, Sheila E.
Luna, Kristin K.
Lechner, Joel M.
Qin, Jianbing
Fernando, M. Rohan
author_sort Norton, Sheila E.
collection PubMed
description BACKGROUND: Cell‐free DNA (cfDNA) circulating in blood is currently used for noninvasive diagnostic and prognostic tests. Minimizing background DNA is vital for detection of low abundance cfDNA. We investigated whether a new blood collection device could reduce background levels of genomic DNA (gDNA) in plasma compared to K (3) EDTA tubes, when subjected to conditions that may occur during sample storage and shipping. METHODS: Blood samples were drawn from healthy donors into K (3) EDTA and Cell‐Free DNA™ BCT (BCT). To simulate shipping, samples were shaken or left unshaken. In a shipping study, samples were shipped or not shipped. To assess temperature variations, samples were incubated at 6°C, 22°C, and 37°C. In all cases, plasma was harvested by centrifugation and total plasma DNA (pDNA) assayed by quantitative real‐time polymerase chain reaction (qPCR). RESULTS: Shaking and shipping blood in K (3) EDTA tubes showed significant increases in pDNA, whereas no change was seen in BCTs. Blood in K (3) EDTA tubes incubated at 6°C, 22°C, and 37°C showed increases in pDNA while pDNA from BCTs remained stable. CONCLUSIONS: BCTs prevent increases in gDNA levels that can occur during sample storage and shipping. This new device permits low abundance DNA target detection and allows accurate cfDNA concentrations.
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spelling pubmed-37487852013-08-22 A New Blood Collection Device Minimizes Cellular DNA Release During Sample Storage and Shipping When Compared to a Standard Device Norton, Sheila E. Luna, Kristin K. Lechner, Joel M. Qin, Jianbing Fernando, M. Rohan J Clin Lab Anal Research Articles BACKGROUND: Cell‐free DNA (cfDNA) circulating in blood is currently used for noninvasive diagnostic and prognostic tests. Minimizing background DNA is vital for detection of low abundance cfDNA. We investigated whether a new blood collection device could reduce background levels of genomic DNA (gDNA) in plasma compared to K (3) EDTA tubes, when subjected to conditions that may occur during sample storage and shipping. METHODS: Blood samples were drawn from healthy donors into K (3) EDTA and Cell‐Free DNA™ BCT (BCT). To simulate shipping, samples were shaken or left unshaken. In a shipping study, samples were shipped or not shipped. To assess temperature variations, samples were incubated at 6°C, 22°C, and 37°C. In all cases, plasma was harvested by centrifugation and total plasma DNA (pDNA) assayed by quantitative real‐time polymerase chain reaction (qPCR). RESULTS: Shaking and shipping blood in K (3) EDTA tubes showed significant increases in pDNA, whereas no change was seen in BCTs. Blood in K (3) EDTA tubes incubated at 6°C, 22°C, and 37°C showed increases in pDNA while pDNA from BCTs remained stable. CONCLUSIONS: BCTs prevent increases in gDNA levels that can occur during sample storage and shipping. This new device permits low abundance DNA target detection and allows accurate cfDNA concentrations. John Wiley and Sons Inc. 2013-07-12 /pmc/articles/PMC3748785/ /pubmed/23852790 http://dx.doi.org/10.1002/jcla.21603 Text en © 2013 Wiley Periodicals, Inc. Open access.
spellingShingle Research Articles
Norton, Sheila E.
Luna, Kristin K.
Lechner, Joel M.
Qin, Jianbing
Fernando, M. Rohan
A New Blood Collection Device Minimizes Cellular DNA Release During Sample Storage and Shipping When Compared to a Standard Device
title A New Blood Collection Device Minimizes Cellular DNA Release During Sample Storage and Shipping When Compared to a Standard Device
title_full A New Blood Collection Device Minimizes Cellular DNA Release During Sample Storage and Shipping When Compared to a Standard Device
title_fullStr A New Blood Collection Device Minimizes Cellular DNA Release During Sample Storage and Shipping When Compared to a Standard Device
title_full_unstemmed A New Blood Collection Device Minimizes Cellular DNA Release During Sample Storage and Shipping When Compared to a Standard Device
title_short A New Blood Collection Device Minimizes Cellular DNA Release During Sample Storage and Shipping When Compared to a Standard Device
title_sort new blood collection device minimizes cellular dna release during sample storage and shipping when compared to a standard device
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3748785/
https://www.ncbi.nlm.nih.gov/pubmed/23852790
http://dx.doi.org/10.1002/jcla.21603
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