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A quantitative reference transcriptome for Nematostella vectensis early embryonic development: a pipeline for de novo assembly in emerging model systems

BACKGROUND: The de novo assembly of transcriptomes from short shotgun sequences raises challenges due to random and non-random sequencing biases and inherent transcript complexity. We sought to define a pipeline for de novo transcriptome assembly to aid researchers working with emerging model system...

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Detalles Bibliográficos
Autores principales: Tulin, Sarah, Aguiar, Derek, Istrail, Sorin, Smith, Joel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3748831/
https://www.ncbi.nlm.nih.gov/pubmed/23731568
http://dx.doi.org/10.1186/2041-9139-4-16

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