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Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis
The oyster mushroom (Pleurotus ostreatus) is one of the most important edible mushrooms worldwide. The mechanism of P. ostreatus fruiting body development has been of interest both for the basic understanding of the phenotypic change of the mycelium-fruiting body and to improve breeding of the mushr...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Korean Society of Mycology
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3749394/ https://www.ncbi.nlm.nih.gov/pubmed/23983539 http://dx.doi.org/10.4489/MYCO.2009.37.3.230 |
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author | Lee, Seung-Ho Joh, Joong-Ho Lee, Jin-Sung Lim, Jong-Hyun Kim, Kyung-Yun Yoo, Young-Bok Lee, Chang-Soo Kim, Beom-Gi |
author_facet | Lee, Seung-Ho Joh, Joong-Ho Lee, Jin-Sung Lim, Jong-Hyun Kim, Kyung-Yun Yoo, Young-Bok Lee, Chang-Soo Kim, Beom-Gi |
author_sort | Lee, Seung-Ho |
collection | PubMed |
description | The oyster mushroom (Pleurotus ostreatus) is one of the most important edible mushrooms worldwide. The mechanism of P. ostreatus fruiting body development has been of interest both for the basic understanding of the phenotypic change of the mycelium-fruiting body and to improve breeding of the mushrooms. Based on our previous publication of P. ostreatus expressed sequence tag database, 1,528 unigene clones were used in macroarray analysis of mycelium, fruiting body and basidiospore developmental stages of P. ostreatus. Gene expression profile databases generated by evaluating expression levels showed that 33, 10, and 94 genes were abundantly expressed in mycelium, fruiting body and basidiospore developmental stages, respectively. Among them, the genes specifically expressed in the fruiting body stage were further analyzed by reverse transcription-polymerase chain reaction and Northern blot to investigate temporal and spatial expression patterns. These results provide useful information for future studies of edible mushroom development. |
format | Online Article Text |
id | pubmed-3749394 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | The Korean Society of Mycology |
record_format | MEDLINE/PubMed |
spelling | pubmed-37493942013-08-27 Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis Lee, Seung-Ho Joh, Joong-Ho Lee, Jin-Sung Lim, Jong-Hyun Kim, Kyung-Yun Yoo, Young-Bok Lee, Chang-Soo Kim, Beom-Gi Mycobiology Research Article The oyster mushroom (Pleurotus ostreatus) is one of the most important edible mushrooms worldwide. The mechanism of P. ostreatus fruiting body development has been of interest both for the basic understanding of the phenotypic change of the mycelium-fruiting body and to improve breeding of the mushrooms. Based on our previous publication of P. ostreatus expressed sequence tag database, 1,528 unigene clones were used in macroarray analysis of mycelium, fruiting body and basidiospore developmental stages of P. ostreatus. Gene expression profile databases generated by evaluating expression levels showed that 33, 10, and 94 genes were abundantly expressed in mycelium, fruiting body and basidiospore developmental stages, respectively. Among them, the genes specifically expressed in the fruiting body stage were further analyzed by reverse transcription-polymerase chain reaction and Northern blot to investigate temporal and spatial expression patterns. These results provide useful information for future studies of edible mushroom development. The Korean Society of Mycology 2009-09 2009-09-30 /pmc/articles/PMC3749394/ /pubmed/23983539 http://dx.doi.org/10.4489/MYCO.2009.37.3.230 Text en Copyright © 2009 The Korean Society of Mycology http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Lee, Seung-Ho Joh, Joong-Ho Lee, Jin-Sung Lim, Jong-Hyun Kim, Kyung-Yun Yoo, Young-Bok Lee, Chang-Soo Kim, Beom-Gi Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis |
title | Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis |
title_full | Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis |
title_fullStr | Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis |
title_full_unstemmed | Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis |
title_short | Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis |
title_sort | isolation of genes specifically expressed in different developmental stages of pleurotus ostreatus using macroarray analysis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3749394/ https://www.ncbi.nlm.nih.gov/pubmed/23983539 http://dx.doi.org/10.4489/MYCO.2009.37.3.230 |
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