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Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis

The oyster mushroom (Pleurotus ostreatus) is one of the most important edible mushrooms worldwide. The mechanism of P. ostreatus fruiting body development has been of interest both for the basic understanding of the phenotypic change of the mycelium-fruiting body and to improve breeding of the mushr...

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Autores principales: Lee, Seung-Ho, Joh, Joong-Ho, Lee, Jin-Sung, Lim, Jong-Hyun, Kim, Kyung-Yun, Yoo, Young-Bok, Lee, Chang-Soo, Kim, Beom-Gi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society of Mycology 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3749394/
https://www.ncbi.nlm.nih.gov/pubmed/23983539
http://dx.doi.org/10.4489/MYCO.2009.37.3.230
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author Lee, Seung-Ho
Joh, Joong-Ho
Lee, Jin-Sung
Lim, Jong-Hyun
Kim, Kyung-Yun
Yoo, Young-Bok
Lee, Chang-Soo
Kim, Beom-Gi
author_facet Lee, Seung-Ho
Joh, Joong-Ho
Lee, Jin-Sung
Lim, Jong-Hyun
Kim, Kyung-Yun
Yoo, Young-Bok
Lee, Chang-Soo
Kim, Beom-Gi
author_sort Lee, Seung-Ho
collection PubMed
description The oyster mushroom (Pleurotus ostreatus) is one of the most important edible mushrooms worldwide. The mechanism of P. ostreatus fruiting body development has been of interest both for the basic understanding of the phenotypic change of the mycelium-fruiting body and to improve breeding of the mushrooms. Based on our previous publication of P. ostreatus expressed sequence tag database, 1,528 unigene clones were used in macroarray analysis of mycelium, fruiting body and basidiospore developmental stages of P. ostreatus. Gene expression profile databases generated by evaluating expression levels showed that 33, 10, and 94 genes were abundantly expressed in mycelium, fruiting body and basidiospore developmental stages, respectively. Among them, the genes specifically expressed in the fruiting body stage were further analyzed by reverse transcription-polymerase chain reaction and Northern blot to investigate temporal and spatial expression patterns. These results provide useful information for future studies of edible mushroom development.
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spelling pubmed-37493942013-08-27 Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis Lee, Seung-Ho Joh, Joong-Ho Lee, Jin-Sung Lim, Jong-Hyun Kim, Kyung-Yun Yoo, Young-Bok Lee, Chang-Soo Kim, Beom-Gi Mycobiology Research Article The oyster mushroom (Pleurotus ostreatus) is one of the most important edible mushrooms worldwide. The mechanism of P. ostreatus fruiting body development has been of interest both for the basic understanding of the phenotypic change of the mycelium-fruiting body and to improve breeding of the mushrooms. Based on our previous publication of P. ostreatus expressed sequence tag database, 1,528 unigene clones were used in macroarray analysis of mycelium, fruiting body and basidiospore developmental stages of P. ostreatus. Gene expression profile databases generated by evaluating expression levels showed that 33, 10, and 94 genes were abundantly expressed in mycelium, fruiting body and basidiospore developmental stages, respectively. Among them, the genes specifically expressed in the fruiting body stage were further analyzed by reverse transcription-polymerase chain reaction and Northern blot to investigate temporal and spatial expression patterns. These results provide useful information for future studies of edible mushroom development. The Korean Society of Mycology 2009-09 2009-09-30 /pmc/articles/PMC3749394/ /pubmed/23983539 http://dx.doi.org/10.4489/MYCO.2009.37.3.230 Text en Copyright © 2009 The Korean Society of Mycology http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lee, Seung-Ho
Joh, Joong-Ho
Lee, Jin-Sung
Lim, Jong-Hyun
Kim, Kyung-Yun
Yoo, Young-Bok
Lee, Chang-Soo
Kim, Beom-Gi
Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis
title Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis
title_full Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis
title_fullStr Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis
title_full_unstemmed Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis
title_short Isolation of Genes Specifically Expressed in Different Developmental Stages of Pleurotus ostreatus Using Macroarray Analysis
title_sort isolation of genes specifically expressed in different developmental stages of pleurotus ostreatus using macroarray analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3749394/
https://www.ncbi.nlm.nih.gov/pubmed/23983539
http://dx.doi.org/10.4489/MYCO.2009.37.3.230
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