Cargando…

Classification of genomic signals using dynamic time warping

BACKGROUND: Classification methods of DNA most commonly use comparison of the differences in DNA symbolic records, which requires the global multiple sequence alignment. This solution is often inappropriate, causing a number of imprecisions and requires additional user intervention for exact alignme...

Descripción completa

Detalles Bibliográficos
Autores principales:	Skutkova, Helena, Vitek, Martin, Babula, Petr, Kizek, Rene, Provaznik, Ivo
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2013
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3750471/ https://www.ncbi.nlm.nih.gov/pubmed/24267034 http://dx.doi.org/10.1186/1471-2105-14-S10-S1

Ejemplares similares

Mathematical Evaluation of the Amino Acid and Polyphenol Content and Antioxidant Activities of Fruits from Different Apricot Cultivars
por: Sochor, Jiri, et al.
Publicado: (2011)

Content of Phenolic Compounds and Antioxidant Capacity in Fruits of Apricot Genotypes
por: Sochor, Jiri, et al.
Publicado: (2010)

Effect of Five Different Stages of Ripening on Chemical Compounds in Medlar (Mespilus germanica L.)
por: Rop, Otakar, et al.
Publicado: (2010)

Normalization and possibility of classification analysis using the optimal warping paths of dynamic time warping in gait analysis
por: Lee, Hyun-Seob
Publicado: (2023)

Bipartite Graphs for Visualization Analysis of Microbiome Data
por: Sedlar, Karel, et al.
Publicado: (2016)

Assessing Predictive Ability of Dynamic Time Warping Functional Connectivity for ASD Classification
por: Liu, Christopher, et al.
Publicado: (2023)

Data Augmentation with Suboptimal Warping for Time-Series Classification
por: Kamycki, Krzysztof, et al.
Publicado: (2019)

Time warps
por: Gribbin, John
Publicado: (1979)

Classification of biosensor time series using dynamic time warping: applications in screening cancer cells with characteristic biomarkers
por: Rai, Shesh N, et al.
Publicado: (2016)

Rapid Bacterial Species Delineation Based on Parameters Derived From Genome Numerical Representations
por: Maderankova, Denisa, et al.
Publicado: (2019)

ERP latency contrasts using Dynamic Time Warping algorithm
por: Zoumpoulaki, A, et al.
Publicado: (2013)

Electrochemical Determination of Low Molecular Mass Thiols Content in Potatoes (Solanum tuberosum) Cultivated in the Presence of Various Sulphur Forms and Infected by Late Blight (Phytophora infestans)
por: Ryant, Pavel, et al.
Publicado: (2008)

Building a Graph Signal Processing Model Using Dynamic Time Warping for Load Disaggregation
por: He, Kanghang, et al.
Publicado: (2020)

Using deep learning for gene detection and classification in raw nanopore signals
por: Nykrynova, Marketa, et al.
Publicado: (2022)

Sharka: The Past, The Present and The Future
por: Sochor, Jiri, et al.
Publicado: (2012)

Amperometric Sensor for Detection of Chloride Ions
por: Trnkova, Libuse, et al.
Publicado: (2008)

Application of dynamic time warping algorithm for pattern similarity of gait
por: Lee, Hyun-Seob
Publicado: (2019)

Severity Classification Using Dynamic Time Warping–Based Voice Biomarkers for Patients With COVID-19: Feasibility Cross-Sectional Study
por: Watase, Teruhisa, et al.
Publicado: (2023)

Serum and Tissue Zinc in Epithelial Malignancies: A Meta-Analysis
por: Gumulec, Jaromir, et al.
Publicado: (2014)

Advanced DNA fingerprint genotyping based on a model developed from real chip electrophoresis data
por: Skutkova, Helena, et al.
Publicado: (2019)

A degeneration-reducing criterion for optimal digital mapping of genetic codes
por: Skutkova, Helena, et al.
Publicado: (2019)

Clustering of Bacterial Growth Dynamics in Response to Growth Media by Dynamic Time Warping
por: Cao, Yang-Yang, et al.
Publicado: (2020)

Searching and Mining Trillions of Time Series Subsequences under Dynamic Time Warping
por: Rakthanmanon, Thanawin, et al.
Publicado: (2012)

Using Multi-Dimensional Dynamic Time Warping to Identify Time-Varying Lead-Lag Relationships
por: Stübinger, Johannes, et al.
Publicado: (2022)

Self-rated health trajectories: A dynamic time warp analysis
por: Doornenbal, Brian M., et al.
Publicado: (2021)

Time-Warp–Invariant Neuronal Processing
por: Gütig, Robert, et al.
Publicado: (2009)

Holography of asymmetrically warped space-times
por: Creminelli, Paolo
Publicado: (2001)

Time tunnels meet warped passages
por: Kushner, David
Publicado: (2006)

Pulse Waveform Classification Using Support Vector Machine with Gaussian Time Warp Edit Distance Kernel
por: Jia, Danbing, et al.
Publicado: (2014)

Resting State fMRI Functional Connectivity Analysis Using Dynamic Time Warping
por: Meszlényi, Regina J., et al.
Publicado: (2017)

A new method to analyze protein sequence similarity using Dynamic Time Warping
por: Hou, Wenbing, et al.
Publicado: (2017)

EventDTW: An Improved Dynamic Time Warping Algorithm for Aligning Biomedical Signals of Nonuniform Sampling Frequencies
por: Jiang, Yihang, et al.
Publicado: (2020)

Fast time-varying linear filters for suppression of baseline drift in electrocardiographic signals
por: Kozumplík, Jiří, et al.
Publicado: (2017)

Incremental fuzzy C medoids clustering of time series data using dynamic time warping distance
por: Liu, Yongli, et al.
Publicado: (2018)

Combined Dynamic Time Warping with Multiple Sensors for 3D Gesture Recognition
por: Choi, Hyo-Rim, et al.
Publicado: (2017)

IMU Consensus Exception Detection with Dynamic Time Warping—A Comparative Approach
por: Yang, Chan-Yun, et al.
Publicado: (2019)

Twadn: an efficient alignment algorithm based on time warping for pairwise dynamic networks
por: Zhong, Yuanke, et al.
Publicado: (2020)

Dynamic Time Warping Algorithm in Modeling Systemic Risk in the European Insurance Sector
por: Denkowska, Anna, et al.
Publicado: (2021)

Evaluation of Postural Sway in Post-stroke Patients by Dynamic Time Warping Clustering
por: Li, Dongdong, et al.
Publicado: (2021)

Computer-Aided Detection of Fiducial Points in Seismocardiography through Dynamic Time Warping
por: Chen, Chien-Hung, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_pnqo1ge5au7rvg4lkisceciod4