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The COMBREX Project: Design, Methodology, and Initial Results

Experimental data exists for only a vanishingly small fraction of sequenced microbial genes. This community page discusses the progress made by the COMBREX project to address this important issue using both computational and experimental resources.

Detalles Bibliográficos
Autores principales: Anton, Brian P., Chang, Yi-Chien, Brown, Peter, Choi, Han-Pil, Faller, Lina L., Guleria, Jyotsna, Hu, Zhenjun, Klitgord, Niels, Levy-Moonshine, Ami, Maksad, Almaz, Mazumdar, Varun, McGettrick, Mark, Osmani, Lais, Pokrzywa, Revonda, Rachlin, John, Swaminathan, Rajeswari, Allen, Benjamin, Housman, Genevieve, Monahan, Caitlin, Rochussen, Krista, Tao, Kevin, Bhagwat, Ashok S., Brenner, Steven E., Columbus, Linda, de Crécy-Lagard, Valérie, Ferguson, Donald, Fomenkov, Alexey, Gadda, Giovanni, Morgan, Richard D., Osterman, Andrei L., Rodionov, Dmitry A., Rodionova, Irina A., Rudd, Kenneth E., Söll, Dieter, Spain, James, Xu, Shuang-yong, Bateman, Alex, Blumenthal, Robert M., Bollinger, J. Martin, Chang, Woo-Suk, Ferrer, Manuel, Friedberg, Iddo, Galperin, Michael Y., Gobeill, Julien, Haft, Daniel, Hunt, John, Karp, Peter, Klimke, William, Krebs, Carsten, Macelis, Dana, Madupu, Ramana, Martin, Maria J., Miller, Jeffrey H., O'Donovan, Claire, Palsson, Bernhard, Ruch, Patrick, Setterdahl, Aaron, Sutton, Granger, Tate, John, Yakunin, Alexander, Tchigvintsev, Dmitri, Plata, Germán, Hu, Jie, Greiner, Russell, Horn, David, Sjölander, Kimmen, Salzberg, Steven L., Vitkup, Dennis, Letovsky, Stanley, Segrè, Daniel, DeLisi, Charles, Roberts, Richard J., Steffen, Martin, Kasif, Simon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3754883/
https://www.ncbi.nlm.nih.gov/pubmed/24013487
http://dx.doi.org/10.1371/journal.pbio.1001638
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author Anton, Brian P.
Chang, Yi-Chien
Brown, Peter
Choi, Han-Pil
Faller, Lina L.
Guleria, Jyotsna
Hu, Zhenjun
Klitgord, Niels
Levy-Moonshine, Ami
Maksad, Almaz
Mazumdar, Varun
McGettrick, Mark
Osmani, Lais
Pokrzywa, Revonda
Rachlin, John
Swaminathan, Rajeswari
Allen, Benjamin
Housman, Genevieve
Monahan, Caitlin
Rochussen, Krista
Tao, Kevin
Bhagwat, Ashok S.
Brenner, Steven E.
Columbus, Linda
de Crécy-Lagard, Valérie
Ferguson, Donald
Fomenkov, Alexey
Gadda, Giovanni
Morgan, Richard D.
Osterman, Andrei L.
Rodionov, Dmitry A.
Rodionova, Irina A.
Rudd, Kenneth E.
Söll, Dieter
Spain, James
Xu, Shuang-yong
Bateman, Alex
Blumenthal, Robert M.
Bollinger, J. Martin
Chang, Woo-Suk
Ferrer, Manuel
Friedberg, Iddo
Galperin, Michael Y.
Gobeill, Julien
Haft, Daniel
Hunt, John
Karp, Peter
Klimke, William
Krebs, Carsten
Macelis, Dana
Madupu, Ramana
Martin, Maria J.
Miller, Jeffrey H.
O'Donovan, Claire
Palsson, Bernhard
Ruch, Patrick
Setterdahl, Aaron
Sutton, Granger
Tate, John
Yakunin, Alexander
Tchigvintsev, Dmitri
Plata, Germán
Hu, Jie
Greiner, Russell
Horn, David
Sjölander, Kimmen
Salzberg, Steven L.
Vitkup, Dennis
Letovsky, Stanley
Segrè, Daniel
DeLisi, Charles
Roberts, Richard J.
Steffen, Martin
Kasif, Simon
author_facet Anton, Brian P.
Chang, Yi-Chien
Brown, Peter
Choi, Han-Pil
Faller, Lina L.
Guleria, Jyotsna
Hu, Zhenjun
Klitgord, Niels
Levy-Moonshine, Ami
Maksad, Almaz
Mazumdar, Varun
McGettrick, Mark
Osmani, Lais
Pokrzywa, Revonda
Rachlin, John
Swaminathan, Rajeswari
Allen, Benjamin
Housman, Genevieve
Monahan, Caitlin
Rochussen, Krista
Tao, Kevin
Bhagwat, Ashok S.
Brenner, Steven E.
Columbus, Linda
de Crécy-Lagard, Valérie
Ferguson, Donald
Fomenkov, Alexey
Gadda, Giovanni
Morgan, Richard D.
Osterman, Andrei L.
Rodionov, Dmitry A.
Rodionova, Irina A.
Rudd, Kenneth E.
Söll, Dieter
Spain, James
Xu, Shuang-yong
Bateman, Alex
Blumenthal, Robert M.
Bollinger, J. Martin
Chang, Woo-Suk
Ferrer, Manuel
Friedberg, Iddo
Galperin, Michael Y.
Gobeill, Julien
Haft, Daniel
Hunt, John
Karp, Peter
Klimke, William
Krebs, Carsten
Macelis, Dana
Madupu, Ramana
Martin, Maria J.
Miller, Jeffrey H.
O'Donovan, Claire
Palsson, Bernhard
Ruch, Patrick
Setterdahl, Aaron
Sutton, Granger
Tate, John
Yakunin, Alexander
Tchigvintsev, Dmitri
Plata, Germán
Hu, Jie
Greiner, Russell
Horn, David
Sjölander, Kimmen
Salzberg, Steven L.
Vitkup, Dennis
Letovsky, Stanley
Segrè, Daniel
DeLisi, Charles
Roberts, Richard J.
Steffen, Martin
Kasif, Simon
author_sort Anton, Brian P.
collection PubMed
description Experimental data exists for only a vanishingly small fraction of sequenced microbial genes. This community page discusses the progress made by the COMBREX project to address this important issue using both computational and experimental resources.
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spelling pubmed-37548832013-09-06 The COMBREX Project: Design, Methodology, and Initial Results Anton, Brian P. Chang, Yi-Chien Brown, Peter Choi, Han-Pil Faller, Lina L. Guleria, Jyotsna Hu, Zhenjun Klitgord, Niels Levy-Moonshine, Ami Maksad, Almaz Mazumdar, Varun McGettrick, Mark Osmani, Lais Pokrzywa, Revonda Rachlin, John Swaminathan, Rajeswari Allen, Benjamin Housman, Genevieve Monahan, Caitlin Rochussen, Krista Tao, Kevin Bhagwat, Ashok S. Brenner, Steven E. Columbus, Linda de Crécy-Lagard, Valérie Ferguson, Donald Fomenkov, Alexey Gadda, Giovanni Morgan, Richard D. Osterman, Andrei L. Rodionov, Dmitry A. Rodionova, Irina A. Rudd, Kenneth E. Söll, Dieter Spain, James Xu, Shuang-yong Bateman, Alex Blumenthal, Robert M. Bollinger, J. Martin Chang, Woo-Suk Ferrer, Manuel Friedberg, Iddo Galperin, Michael Y. Gobeill, Julien Haft, Daniel Hunt, John Karp, Peter Klimke, William Krebs, Carsten Macelis, Dana Madupu, Ramana Martin, Maria J. Miller, Jeffrey H. O'Donovan, Claire Palsson, Bernhard Ruch, Patrick Setterdahl, Aaron Sutton, Granger Tate, John Yakunin, Alexander Tchigvintsev, Dmitri Plata, Germán Hu, Jie Greiner, Russell Horn, David Sjölander, Kimmen Salzberg, Steven L. Vitkup, Dennis Letovsky, Stanley Segrè, Daniel DeLisi, Charles Roberts, Richard J. Steffen, Martin Kasif, Simon PLoS Biol Community Page Experimental data exists for only a vanishingly small fraction of sequenced microbial genes. This community page discusses the progress made by the COMBREX project to address this important issue using both computational and experimental resources. Public Library of Science 2013-08-27 /pmc/articles/PMC3754883/ /pubmed/24013487 http://dx.doi.org/10.1371/journal.pbio.1001638 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
spellingShingle Community Page
Anton, Brian P.
Chang, Yi-Chien
Brown, Peter
Choi, Han-Pil
Faller, Lina L.
Guleria, Jyotsna
Hu, Zhenjun
Klitgord, Niels
Levy-Moonshine, Ami
Maksad, Almaz
Mazumdar, Varun
McGettrick, Mark
Osmani, Lais
Pokrzywa, Revonda
Rachlin, John
Swaminathan, Rajeswari
Allen, Benjamin
Housman, Genevieve
Monahan, Caitlin
Rochussen, Krista
Tao, Kevin
Bhagwat, Ashok S.
Brenner, Steven E.
Columbus, Linda
de Crécy-Lagard, Valérie
Ferguson, Donald
Fomenkov, Alexey
Gadda, Giovanni
Morgan, Richard D.
Osterman, Andrei L.
Rodionov, Dmitry A.
Rodionova, Irina A.
Rudd, Kenneth E.
Söll, Dieter
Spain, James
Xu, Shuang-yong
Bateman, Alex
Blumenthal, Robert M.
Bollinger, J. Martin
Chang, Woo-Suk
Ferrer, Manuel
Friedberg, Iddo
Galperin, Michael Y.
Gobeill, Julien
Haft, Daniel
Hunt, John
Karp, Peter
Klimke, William
Krebs, Carsten
Macelis, Dana
Madupu, Ramana
Martin, Maria J.
Miller, Jeffrey H.
O'Donovan, Claire
Palsson, Bernhard
Ruch, Patrick
Setterdahl, Aaron
Sutton, Granger
Tate, John
Yakunin, Alexander
Tchigvintsev, Dmitri
Plata, Germán
Hu, Jie
Greiner, Russell
Horn, David
Sjölander, Kimmen
Salzberg, Steven L.
Vitkup, Dennis
Letovsky, Stanley
Segrè, Daniel
DeLisi, Charles
Roberts, Richard J.
Steffen, Martin
Kasif, Simon
The COMBREX Project: Design, Methodology, and Initial Results
title The COMBREX Project: Design, Methodology, and Initial Results
title_full The COMBREX Project: Design, Methodology, and Initial Results
title_fullStr The COMBREX Project: Design, Methodology, and Initial Results
title_full_unstemmed The COMBREX Project: Design, Methodology, and Initial Results
title_short The COMBREX Project: Design, Methodology, and Initial Results
title_sort combrex project: design, methodology, and initial results
topic Community Page
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3754883/
https://www.ncbi.nlm.nih.gov/pubmed/24013487
http://dx.doi.org/10.1371/journal.pbio.1001638
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