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Glycine Insertion Makes Yellow Fluorescent Protein Sensitive to Hydrostatic Pressure

Fluorescent protein-based indicators for intracellular environment conditions such as pH and ion concentrations are commonly used to study the status and dynamics of living cells. Despite being an important factor in many biological processes, the development of an indicator for the physicochemical...

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Autores principales: Watanabe, Tomonobu M., Imada, Katsumi, Yoshizawa, Keiko, Nishiyama, Masayoshi, Kato, Chiaki, Abe, Fumiyoshi, Morikawa, Takamitsu J., Kinoshita, Miki, Fujita, Hideaki, Yanagida, Toshio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3754940/
https://www.ncbi.nlm.nih.gov/pubmed/24014139
http://dx.doi.org/10.1371/journal.pone.0073212
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author Watanabe, Tomonobu M.
Imada, Katsumi
Yoshizawa, Keiko
Nishiyama, Masayoshi
Kato, Chiaki
Abe, Fumiyoshi
Morikawa, Takamitsu J.
Kinoshita, Miki
Fujita, Hideaki
Yanagida, Toshio
author_facet Watanabe, Tomonobu M.
Imada, Katsumi
Yoshizawa, Keiko
Nishiyama, Masayoshi
Kato, Chiaki
Abe, Fumiyoshi
Morikawa, Takamitsu J.
Kinoshita, Miki
Fujita, Hideaki
Yanagida, Toshio
author_sort Watanabe, Tomonobu M.
collection PubMed
description Fluorescent protein-based indicators for intracellular environment conditions such as pH and ion concentrations are commonly used to study the status and dynamics of living cells. Despite being an important factor in many biological processes, the development of an indicator for the physicochemical state of water, such as pressure, viscosity and temperature, however, has been neglected. We here found a novel mutation that dramatically enhances the pressure dependency of the yellow fluorescent protein (YFP) by inserting several glycines into it. The crystal structure of the mutant showed that the tyrosine near the chromophore flipped toward the outside of the β-can structure, resulting in the entry of a few water molecules near the chromophore. In response to changes in hydrostatic pressure, a spectrum shift and an intensity change of the fluorescence were observed. By measuring the fluorescence of the YFP mutant, we succeeded in measuring the intracellular pressure change in living cell. This study shows a new strategy of design to engineer fluorescent protein indicators to sense hydrostatic pressure.
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spelling pubmed-37549402013-09-06 Glycine Insertion Makes Yellow Fluorescent Protein Sensitive to Hydrostatic Pressure Watanabe, Tomonobu M. Imada, Katsumi Yoshizawa, Keiko Nishiyama, Masayoshi Kato, Chiaki Abe, Fumiyoshi Morikawa, Takamitsu J. Kinoshita, Miki Fujita, Hideaki Yanagida, Toshio PLoS One Research Article Fluorescent protein-based indicators for intracellular environment conditions such as pH and ion concentrations are commonly used to study the status and dynamics of living cells. Despite being an important factor in many biological processes, the development of an indicator for the physicochemical state of water, such as pressure, viscosity and temperature, however, has been neglected. We here found a novel mutation that dramatically enhances the pressure dependency of the yellow fluorescent protein (YFP) by inserting several glycines into it. The crystal structure of the mutant showed that the tyrosine near the chromophore flipped toward the outside of the β-can structure, resulting in the entry of a few water molecules near the chromophore. In response to changes in hydrostatic pressure, a spectrum shift and an intensity change of the fluorescence were observed. By measuring the fluorescence of the YFP mutant, we succeeded in measuring the intracellular pressure change in living cell. This study shows a new strategy of design to engineer fluorescent protein indicators to sense hydrostatic pressure. Public Library of Science 2013-08-27 /pmc/articles/PMC3754940/ /pubmed/24014139 http://dx.doi.org/10.1371/journal.pone.0073212 Text en © 2013 Watanabe et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Watanabe, Tomonobu M.
Imada, Katsumi
Yoshizawa, Keiko
Nishiyama, Masayoshi
Kato, Chiaki
Abe, Fumiyoshi
Morikawa, Takamitsu J.
Kinoshita, Miki
Fujita, Hideaki
Yanagida, Toshio
Glycine Insertion Makes Yellow Fluorescent Protein Sensitive to Hydrostatic Pressure
title Glycine Insertion Makes Yellow Fluorescent Protein Sensitive to Hydrostatic Pressure
title_full Glycine Insertion Makes Yellow Fluorescent Protein Sensitive to Hydrostatic Pressure
title_fullStr Glycine Insertion Makes Yellow Fluorescent Protein Sensitive to Hydrostatic Pressure
title_full_unstemmed Glycine Insertion Makes Yellow Fluorescent Protein Sensitive to Hydrostatic Pressure
title_short Glycine Insertion Makes Yellow Fluorescent Protein Sensitive to Hydrostatic Pressure
title_sort glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3754940/
https://www.ncbi.nlm.nih.gov/pubmed/24014139
http://dx.doi.org/10.1371/journal.pone.0073212
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