Cargando…
Ordered Disorder of the Astrocytic Dystrophin-Associated Protein Complex in the Norm and Pathology
The abundance and potential functional roles of intrinsically disordered regions in aquaporin-4, Kir4.1, a dystrophin isoforms Dp71, α-1 syntrophin, and α-dystrobrevin; i.e., proteins constituting the functional core of the astrocytic dystrophin-associated protein complex (DAPC), are analyzed by a w...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3754965/ https://www.ncbi.nlm.nih.gov/pubmed/24014171 http://dx.doi.org/10.1371/journal.pone.0073476 |
_version_ | 1782281939261063168 |
---|---|
author | Na, Insung Redmon, Derek Kopa, Markus Qin, Yiru Xue, Bin Uversky, Vladimir N. |
author_facet | Na, Insung Redmon, Derek Kopa, Markus Qin, Yiru Xue, Bin Uversky, Vladimir N. |
author_sort | Na, Insung |
collection | PubMed |
description | The abundance and potential functional roles of intrinsically disordered regions in aquaporin-4, Kir4.1, a dystrophin isoforms Dp71, α-1 syntrophin, and α-dystrobrevin; i.e., proteins constituting the functional core of the astrocytic dystrophin-associated protein complex (DAPC), are analyzed by a wealth of computational tools. The correlation between protein intrinsic disorder, single nucleotide polymorphisms (SNPs) and protein function is also studied together with the peculiarities of structural and functional conservation of these proteins. Our study revealed that the DAPC members are typical hybrid proteins that contain both ordered and intrinsically disordered regions. Both ordered and disordered regions are important for the stabilization of this complex. Many disordered binding regions of these five proteins are highly conserved among vertebrates. Conserved eukaryotic linear motifs and molecular recognition features found in the disordered regions of five protein constituting DAPC likely enhance protein-protein interactions that are required for the cellular functions of this complex. Curiously, the disorder-based binding regions are rarely affected by SNPs suggesting that these regions are crucial for the biological functions of their corresponding proteins. |
format | Online Article Text |
id | pubmed-3754965 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-37549652013-09-06 Ordered Disorder of the Astrocytic Dystrophin-Associated Protein Complex in the Norm and Pathology Na, Insung Redmon, Derek Kopa, Markus Qin, Yiru Xue, Bin Uversky, Vladimir N. PLoS One Research Article The abundance and potential functional roles of intrinsically disordered regions in aquaporin-4, Kir4.1, a dystrophin isoforms Dp71, α-1 syntrophin, and α-dystrobrevin; i.e., proteins constituting the functional core of the astrocytic dystrophin-associated protein complex (DAPC), are analyzed by a wealth of computational tools. The correlation between protein intrinsic disorder, single nucleotide polymorphisms (SNPs) and protein function is also studied together with the peculiarities of structural and functional conservation of these proteins. Our study revealed that the DAPC members are typical hybrid proteins that contain both ordered and intrinsically disordered regions. Both ordered and disordered regions are important for the stabilization of this complex. Many disordered binding regions of these five proteins are highly conserved among vertebrates. Conserved eukaryotic linear motifs and molecular recognition features found in the disordered regions of five protein constituting DAPC likely enhance protein-protein interactions that are required for the cellular functions of this complex. Curiously, the disorder-based binding regions are rarely affected by SNPs suggesting that these regions are crucial for the biological functions of their corresponding proteins. Public Library of Science 2013-08-27 /pmc/articles/PMC3754965/ /pubmed/24014171 http://dx.doi.org/10.1371/journal.pone.0073476 Text en © 2013 Na et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Na, Insung Redmon, Derek Kopa, Markus Qin, Yiru Xue, Bin Uversky, Vladimir N. Ordered Disorder of the Astrocytic Dystrophin-Associated Protein Complex in the Norm and Pathology |
title | Ordered Disorder of the Astrocytic Dystrophin-Associated Protein Complex in the Norm and Pathology |
title_full | Ordered Disorder of the Astrocytic Dystrophin-Associated Protein Complex in the Norm and Pathology |
title_fullStr | Ordered Disorder of the Astrocytic Dystrophin-Associated Protein Complex in the Norm and Pathology |
title_full_unstemmed | Ordered Disorder of the Astrocytic Dystrophin-Associated Protein Complex in the Norm and Pathology |
title_short | Ordered Disorder of the Astrocytic Dystrophin-Associated Protein Complex in the Norm and Pathology |
title_sort | ordered disorder of the astrocytic dystrophin-associated protein complex in the norm and pathology |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3754965/ https://www.ncbi.nlm.nih.gov/pubmed/24014171 http://dx.doi.org/10.1371/journal.pone.0073476 |
work_keys_str_mv | AT nainsung ordereddisorderoftheastrocyticdystrophinassociatedproteincomplexinthenormandpathology AT redmonderek ordereddisorderoftheastrocyticdystrophinassociatedproteincomplexinthenormandpathology AT kopamarkus ordereddisorderoftheastrocyticdystrophinassociatedproteincomplexinthenormandpathology AT qinyiru ordereddisorderoftheastrocyticdystrophinassociatedproteincomplexinthenormandpathology AT xuebin ordereddisorderoftheastrocyticdystrophinassociatedproteincomplexinthenormandpathology AT uverskyvladimirn ordereddisorderoftheastrocyticdystrophinassociatedproteincomplexinthenormandpathology |