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Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification

Early diagnosis and early medical treatments are the keys to save the patients' lives and improve the living quality. Fourier transform infrared (FT-IR) spectroscopy can distinguish malignant from normal tissues at the molecular level. In this paper, programs were made with pattern recognition...

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Detalles Bibliográficos
Autores principales: Li, Qingbo, Wang, Wei, Ling, Xiaofeng, Wu, Jin Guang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3755429/
https://www.ncbi.nlm.nih.gov/pubmed/24000331
http://dx.doi.org/10.1155/2013/942427
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author Li, Qingbo
Wang, Wei
Ling, Xiaofeng
Wu, Jin Guang
author_facet Li, Qingbo
Wang, Wei
Ling, Xiaofeng
Wu, Jin Guang
author_sort Li, Qingbo
collection PubMed
description Early diagnosis and early medical treatments are the keys to save the patients' lives and improve the living quality. Fourier transform infrared (FT-IR) spectroscopy can distinguish malignant from normal tissues at the molecular level. In this paper, programs were made with pattern recognition method to classify unknown samples. Spectral data were pretreated by using smoothing and standard normal variate (SNV) methods. Leave-one-out cross validation was used to evaluate the discrimination result of support vector machine (SVM) method. A total of 54 gastric tissue samples were employed in this study, including 24 cases of normal tissue samples and 30 cases of cancerous tissue samples. The discrimination results of SVM method showed the sensitivity with 100%, specificity with 83.3%, and total discrimination accuracy with 92.2%.
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spelling pubmed-37554292013-09-02 Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification Li, Qingbo Wang, Wei Ling, Xiaofeng Wu, Jin Guang Biomed Res Int Research Article Early diagnosis and early medical treatments are the keys to save the patients' lives and improve the living quality. Fourier transform infrared (FT-IR) spectroscopy can distinguish malignant from normal tissues at the molecular level. In this paper, programs were made with pattern recognition method to classify unknown samples. Spectral data were pretreated by using smoothing and standard normal variate (SNV) methods. Leave-one-out cross validation was used to evaluate the discrimination result of support vector machine (SVM) method. A total of 54 gastric tissue samples were employed in this study, including 24 cases of normal tissue samples and 30 cases of cancerous tissue samples. The discrimination results of SVM method showed the sensitivity with 100%, specificity with 83.3%, and total discrimination accuracy with 92.2%. Hindawi Publishing Corporation 2013 2013-08-13 /pmc/articles/PMC3755429/ /pubmed/24000331 http://dx.doi.org/10.1155/2013/942427 Text en Copyright © 2013 Qingbo Li et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Li, Qingbo
Wang, Wei
Ling, Xiaofeng
Wu, Jin Guang
Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification
title Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification
title_full Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification
title_fullStr Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification
title_full_unstemmed Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification
title_short Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification
title_sort detection of gastric cancer with fourier transform infrared spectroscopy and support vector machine classification
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3755429/
https://www.ncbi.nlm.nih.gov/pubmed/24000331
http://dx.doi.org/10.1155/2013/942427
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