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Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification
Early diagnosis and early medical treatments are the keys to save the patients' lives and improve the living quality. Fourier transform infrared (FT-IR) spectroscopy can distinguish malignant from normal tissues at the molecular level. In this paper, programs were made with pattern recognition...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3755429/ https://www.ncbi.nlm.nih.gov/pubmed/24000331 http://dx.doi.org/10.1155/2013/942427 |
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author | Li, Qingbo Wang, Wei Ling, Xiaofeng Wu, Jin Guang |
author_facet | Li, Qingbo Wang, Wei Ling, Xiaofeng Wu, Jin Guang |
author_sort | Li, Qingbo |
collection | PubMed |
description | Early diagnosis and early medical treatments are the keys to save the patients' lives and improve the living quality. Fourier transform infrared (FT-IR) spectroscopy can distinguish malignant from normal tissues at the molecular level. In this paper, programs were made with pattern recognition method to classify unknown samples. Spectral data were pretreated by using smoothing and standard normal variate (SNV) methods. Leave-one-out cross validation was used to evaluate the discrimination result of support vector machine (SVM) method. A total of 54 gastric tissue samples were employed in this study, including 24 cases of normal tissue samples and 30 cases of cancerous tissue samples. The discrimination results of SVM method showed the sensitivity with 100%, specificity with 83.3%, and total discrimination accuracy with 92.2%. |
format | Online Article Text |
id | pubmed-3755429 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-37554292013-09-02 Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification Li, Qingbo Wang, Wei Ling, Xiaofeng Wu, Jin Guang Biomed Res Int Research Article Early diagnosis and early medical treatments are the keys to save the patients' lives and improve the living quality. Fourier transform infrared (FT-IR) spectroscopy can distinguish malignant from normal tissues at the molecular level. In this paper, programs were made with pattern recognition method to classify unknown samples. Spectral data were pretreated by using smoothing and standard normal variate (SNV) methods. Leave-one-out cross validation was used to evaluate the discrimination result of support vector machine (SVM) method. A total of 54 gastric tissue samples were employed in this study, including 24 cases of normal tissue samples and 30 cases of cancerous tissue samples. The discrimination results of SVM method showed the sensitivity with 100%, specificity with 83.3%, and total discrimination accuracy with 92.2%. Hindawi Publishing Corporation 2013 2013-08-13 /pmc/articles/PMC3755429/ /pubmed/24000331 http://dx.doi.org/10.1155/2013/942427 Text en Copyright © 2013 Qingbo Li et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Li, Qingbo Wang, Wei Ling, Xiaofeng Wu, Jin Guang Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification |
title | Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification |
title_full | Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification |
title_fullStr | Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification |
title_full_unstemmed | Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification |
title_short | Detection of Gastric Cancer with Fourier Transform Infrared Spectroscopy and Support Vector Machine Classification |
title_sort | detection of gastric cancer with fourier transform infrared spectroscopy and support vector machine classification |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3755429/ https://www.ncbi.nlm.nih.gov/pubmed/24000331 http://dx.doi.org/10.1155/2013/942427 |
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