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The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs

Isoprenoidal glycerol dialkyl glycerol tetraethers (iGDGTs) are core membrane lipids of many archaea that enhance the integrity of cytoplasmic membranes in extreme environments. We examined the iGDGT profiles and corresponding aqueous geochemistry in 40 hot spring sediment and microbial mat samples...

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Autores principales: Paraiso, Julienne J., Williams, Amanda J., Huang, Qiuyuan, Wei, Yuli, Dijkstra, Paul, Hungate, Bruce A., Dong, Hailiang, Hedlund, Brian P., Zhang, Chuanlun L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3755460/
https://www.ncbi.nlm.nih.gov/pubmed/24009605
http://dx.doi.org/10.3389/fmicb.2013.00247
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author Paraiso, Julienne J.
Williams, Amanda J.
Huang, Qiuyuan
Wei, Yuli
Dijkstra, Paul
Hungate, Bruce A.
Dong, Hailiang
Hedlund, Brian P.
Zhang, Chuanlun L.
author_facet Paraiso, Julienne J.
Williams, Amanda J.
Huang, Qiuyuan
Wei, Yuli
Dijkstra, Paul
Hungate, Bruce A.
Dong, Hailiang
Hedlund, Brian P.
Zhang, Chuanlun L.
author_sort Paraiso, Julienne J.
collection PubMed
description Isoprenoidal glycerol dialkyl glycerol tetraethers (iGDGTs) are core membrane lipids of many archaea that enhance the integrity of cytoplasmic membranes in extreme environments. We examined the iGDGT profiles and corresponding aqueous geochemistry in 40 hot spring sediment and microbial mat samples from the U.S. Great Basin with temperatures ranging from 31 to 95°C and pH ranging from 6.8 to 10.7. The absolute abundance of iGDGTs correlated negatively with pH and positively with temperature. High lipid concentrations, distinct lipid profiles, and a strong relationship between polar and core lipids in hot spring samples suggested in situ production of most iGDGTs rather than contamination from local soils. Two-way cluster analysis and non-metric multidimensional scaling (NMS) of polar iGDGTs indicated that the relative abundance of individual lipids was most strongly related to temperature (r(2) = 0.546), with moderate correlations with pH (r(2) = 0.359), nitrite (r(2) = 0.286), oxygen (r(2) = 0.259), and nitrate (r(2) = 0.215). Relative abundance profiles of individual polar iGDGTs indicated potential temperature optima for iGDGT-0 (≤70°C), iGDGT-3 (≥55°C), and iGDGT-4 (≥60°C). These relationships likely reflect both physiological adaptations and community-level population shifts in response to temperature differences, such as a shift from cooler samples with more abundant methanogens to higher-temperature samples with more abundant Crenarchaeota. Crenarchaeol was widely distributed across the temperature gradient, which is consistent with other reports of abundant crenarchaeol in Great Basin hot springs and suggests a wide distribution for thermophilic ammonia-oxidizing archaea (AOA).
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spelling pubmed-37554602013-09-04 The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs Paraiso, Julienne J. Williams, Amanda J. Huang, Qiuyuan Wei, Yuli Dijkstra, Paul Hungate, Bruce A. Dong, Hailiang Hedlund, Brian P. Zhang, Chuanlun L. Front Microbiol Microbiology Isoprenoidal glycerol dialkyl glycerol tetraethers (iGDGTs) are core membrane lipids of many archaea that enhance the integrity of cytoplasmic membranes in extreme environments. We examined the iGDGT profiles and corresponding aqueous geochemistry in 40 hot spring sediment and microbial mat samples from the U.S. Great Basin with temperatures ranging from 31 to 95°C and pH ranging from 6.8 to 10.7. The absolute abundance of iGDGTs correlated negatively with pH and positively with temperature. High lipid concentrations, distinct lipid profiles, and a strong relationship between polar and core lipids in hot spring samples suggested in situ production of most iGDGTs rather than contamination from local soils. Two-way cluster analysis and non-metric multidimensional scaling (NMS) of polar iGDGTs indicated that the relative abundance of individual lipids was most strongly related to temperature (r(2) = 0.546), with moderate correlations with pH (r(2) = 0.359), nitrite (r(2) = 0.286), oxygen (r(2) = 0.259), and nitrate (r(2) = 0.215). Relative abundance profiles of individual polar iGDGTs indicated potential temperature optima for iGDGT-0 (≤70°C), iGDGT-3 (≥55°C), and iGDGT-4 (≥60°C). These relationships likely reflect both physiological adaptations and community-level population shifts in response to temperature differences, such as a shift from cooler samples with more abundant methanogens to higher-temperature samples with more abundant Crenarchaeota. Crenarchaeol was widely distributed across the temperature gradient, which is consistent with other reports of abundant crenarchaeol in Great Basin hot springs and suggests a wide distribution for thermophilic ammonia-oxidizing archaea (AOA). Frontiers Media S.A. 2013-08-28 /pmc/articles/PMC3755460/ /pubmed/24009605 http://dx.doi.org/10.3389/fmicb.2013.00247 Text en Copyright © 2013 Paraiso, Williams, Huang, Wei, Dijkstra, Hungate, Dong, Hedlund and Zhang. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Paraiso, Julienne J.
Williams, Amanda J.
Huang, Qiuyuan
Wei, Yuli
Dijkstra, Paul
Hungate, Bruce A.
Dong, Hailiang
Hedlund, Brian P.
Zhang, Chuanlun L.
The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs
title The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs
title_full The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs
title_fullStr The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs
title_full_unstemmed The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs
title_short The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs
title_sort distribution and abundance of archaeal tetraether lipids in u.s. great basin hot springs
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3755460/
https://www.ncbi.nlm.nih.gov/pubmed/24009605
http://dx.doi.org/10.3389/fmicb.2013.00247
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