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The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs
Isoprenoidal glycerol dialkyl glycerol tetraethers (iGDGTs) are core membrane lipids of many archaea that enhance the integrity of cytoplasmic membranes in extreme environments. We examined the iGDGT profiles and corresponding aqueous geochemistry in 40 hot spring sediment and microbial mat samples...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2013
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3755460/ https://www.ncbi.nlm.nih.gov/pubmed/24009605 http://dx.doi.org/10.3389/fmicb.2013.00247 |
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author | Paraiso, Julienne J. Williams, Amanda J. Huang, Qiuyuan Wei, Yuli Dijkstra, Paul Hungate, Bruce A. Dong, Hailiang Hedlund, Brian P. Zhang, Chuanlun L. |
author_facet | Paraiso, Julienne J. Williams, Amanda J. Huang, Qiuyuan Wei, Yuli Dijkstra, Paul Hungate, Bruce A. Dong, Hailiang Hedlund, Brian P. Zhang, Chuanlun L. |
author_sort | Paraiso, Julienne J. |
collection | PubMed |
description | Isoprenoidal glycerol dialkyl glycerol tetraethers (iGDGTs) are core membrane lipids of many archaea that enhance the integrity of cytoplasmic membranes in extreme environments. We examined the iGDGT profiles and corresponding aqueous geochemistry in 40 hot spring sediment and microbial mat samples from the U.S. Great Basin with temperatures ranging from 31 to 95°C and pH ranging from 6.8 to 10.7. The absolute abundance of iGDGTs correlated negatively with pH and positively with temperature. High lipid concentrations, distinct lipid profiles, and a strong relationship between polar and core lipids in hot spring samples suggested in situ production of most iGDGTs rather than contamination from local soils. Two-way cluster analysis and non-metric multidimensional scaling (NMS) of polar iGDGTs indicated that the relative abundance of individual lipids was most strongly related to temperature (r(2) = 0.546), with moderate correlations with pH (r(2) = 0.359), nitrite (r(2) = 0.286), oxygen (r(2) = 0.259), and nitrate (r(2) = 0.215). Relative abundance profiles of individual polar iGDGTs indicated potential temperature optima for iGDGT-0 (≤70°C), iGDGT-3 (≥55°C), and iGDGT-4 (≥60°C). These relationships likely reflect both physiological adaptations and community-level population shifts in response to temperature differences, such as a shift from cooler samples with more abundant methanogens to higher-temperature samples with more abundant Crenarchaeota. Crenarchaeol was widely distributed across the temperature gradient, which is consistent with other reports of abundant crenarchaeol in Great Basin hot springs and suggests a wide distribution for thermophilic ammonia-oxidizing archaea (AOA). |
format | Online Article Text |
id | pubmed-3755460 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-37554602013-09-04 The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs Paraiso, Julienne J. Williams, Amanda J. Huang, Qiuyuan Wei, Yuli Dijkstra, Paul Hungate, Bruce A. Dong, Hailiang Hedlund, Brian P. Zhang, Chuanlun L. Front Microbiol Microbiology Isoprenoidal glycerol dialkyl glycerol tetraethers (iGDGTs) are core membrane lipids of many archaea that enhance the integrity of cytoplasmic membranes in extreme environments. We examined the iGDGT profiles and corresponding aqueous geochemistry in 40 hot spring sediment and microbial mat samples from the U.S. Great Basin with temperatures ranging from 31 to 95°C and pH ranging from 6.8 to 10.7. The absolute abundance of iGDGTs correlated negatively with pH and positively with temperature. High lipid concentrations, distinct lipid profiles, and a strong relationship between polar and core lipids in hot spring samples suggested in situ production of most iGDGTs rather than contamination from local soils. Two-way cluster analysis and non-metric multidimensional scaling (NMS) of polar iGDGTs indicated that the relative abundance of individual lipids was most strongly related to temperature (r(2) = 0.546), with moderate correlations with pH (r(2) = 0.359), nitrite (r(2) = 0.286), oxygen (r(2) = 0.259), and nitrate (r(2) = 0.215). Relative abundance profiles of individual polar iGDGTs indicated potential temperature optima for iGDGT-0 (≤70°C), iGDGT-3 (≥55°C), and iGDGT-4 (≥60°C). These relationships likely reflect both physiological adaptations and community-level population shifts in response to temperature differences, such as a shift from cooler samples with more abundant methanogens to higher-temperature samples with more abundant Crenarchaeota. Crenarchaeol was widely distributed across the temperature gradient, which is consistent with other reports of abundant crenarchaeol in Great Basin hot springs and suggests a wide distribution for thermophilic ammonia-oxidizing archaea (AOA). Frontiers Media S.A. 2013-08-28 /pmc/articles/PMC3755460/ /pubmed/24009605 http://dx.doi.org/10.3389/fmicb.2013.00247 Text en Copyright © 2013 Paraiso, Williams, Huang, Wei, Dijkstra, Hungate, Dong, Hedlund and Zhang. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Paraiso, Julienne J. Williams, Amanda J. Huang, Qiuyuan Wei, Yuli Dijkstra, Paul Hungate, Bruce A. Dong, Hailiang Hedlund, Brian P. Zhang, Chuanlun L. The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs |
title | The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs |
title_full | The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs |
title_fullStr | The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs |
title_full_unstemmed | The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs |
title_short | The distribution and abundance of archaeal tetraether lipids in U.S. Great Basin hot springs |
title_sort | distribution and abundance of archaeal tetraether lipids in u.s. great basin hot springs |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3755460/ https://www.ncbi.nlm.nih.gov/pubmed/24009605 http://dx.doi.org/10.3389/fmicb.2013.00247 |
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