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Time-Optimized High-Resolution Readout-Segmented Diffusion Tensor Imaging

Readout-segmented echo planar imaging with 2D navigator-based reacquisition is an uprising technique enabling the sampling of high-resolution diffusion images with reduced susceptibility artifacts. However, low signal from the small voxels and long scan times hamper the clinical applicability. There...

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Autores principales: Reishofer, Gernot, Koschutnig, Karl, Langkammer, Christian, Porter, David, Jehna, Margit, Enzinger, Christian, Keeling, Stephen, Ebner, Franz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3760803/
https://www.ncbi.nlm.nih.gov/pubmed/24019951
http://dx.doi.org/10.1371/journal.pone.0074156
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author Reishofer, Gernot
Koschutnig, Karl
Langkammer, Christian
Porter, David
Jehna, Margit
Enzinger, Christian
Keeling, Stephen
Ebner, Franz
author_facet Reishofer, Gernot
Koschutnig, Karl
Langkammer, Christian
Porter, David
Jehna, Margit
Enzinger, Christian
Keeling, Stephen
Ebner, Franz
author_sort Reishofer, Gernot
collection PubMed
description Readout-segmented echo planar imaging with 2D navigator-based reacquisition is an uprising technique enabling the sampling of high-resolution diffusion images with reduced susceptibility artifacts. However, low signal from the small voxels and long scan times hamper the clinical applicability. Therefore, we introduce a regularization algorithm based on total variation that is applied directly on the entire diffusion tensor. The spatially varying regularization parameter is determined automatically dependent on spatial variations in signal-to-noise ratio thus, avoiding over- or under-regularization. Information about the noise distribution in the diffusion tensor is extracted from the diffusion weighted images by means of complex independent component analysis. Moreover, the combination of those features enables processing of the diffusion data absolutely user independent. Tractography from in vivo data and from a software phantom demonstrate the advantage of the spatially varying regularization compared to un-regularized data with respect to parameters relevant for fiber-tracking such as Mean Fiber Length, Track Count, Volume and Voxel Count. Specifically, for in vivo data findings suggest that tractography results from the regularized diffusion tensor based on one measurement (16 min) generates results comparable to the un-regularized data with three averages (48 min). This significant reduction in scan time renders high resolution (1×1×2.5 mm(3)) diffusion tensor imaging of the entire brain applicable in a clinical context.
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spelling pubmed-37608032013-09-09 Time-Optimized High-Resolution Readout-Segmented Diffusion Tensor Imaging Reishofer, Gernot Koschutnig, Karl Langkammer, Christian Porter, David Jehna, Margit Enzinger, Christian Keeling, Stephen Ebner, Franz PLoS One Research Article Readout-segmented echo planar imaging with 2D navigator-based reacquisition is an uprising technique enabling the sampling of high-resolution diffusion images with reduced susceptibility artifacts. However, low signal from the small voxels and long scan times hamper the clinical applicability. Therefore, we introduce a regularization algorithm based on total variation that is applied directly on the entire diffusion tensor. The spatially varying regularization parameter is determined automatically dependent on spatial variations in signal-to-noise ratio thus, avoiding over- or under-regularization. Information about the noise distribution in the diffusion tensor is extracted from the diffusion weighted images by means of complex independent component analysis. Moreover, the combination of those features enables processing of the diffusion data absolutely user independent. Tractography from in vivo data and from a software phantom demonstrate the advantage of the spatially varying regularization compared to un-regularized data with respect to parameters relevant for fiber-tracking such as Mean Fiber Length, Track Count, Volume and Voxel Count. Specifically, for in vivo data findings suggest that tractography results from the regularized diffusion tensor based on one measurement (16 min) generates results comparable to the un-regularized data with three averages (48 min). This significant reduction in scan time renders high resolution (1×1×2.5 mm(3)) diffusion tensor imaging of the entire brain applicable in a clinical context. Public Library of Science 2013-09-03 /pmc/articles/PMC3760803/ /pubmed/24019951 http://dx.doi.org/10.1371/journal.pone.0074156 Text en © 2013 Reishofer et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Reishofer, Gernot
Koschutnig, Karl
Langkammer, Christian
Porter, David
Jehna, Margit
Enzinger, Christian
Keeling, Stephen
Ebner, Franz
Time-Optimized High-Resolution Readout-Segmented Diffusion Tensor Imaging
title Time-Optimized High-Resolution Readout-Segmented Diffusion Tensor Imaging
title_full Time-Optimized High-Resolution Readout-Segmented Diffusion Tensor Imaging
title_fullStr Time-Optimized High-Resolution Readout-Segmented Diffusion Tensor Imaging
title_full_unstemmed Time-Optimized High-Resolution Readout-Segmented Diffusion Tensor Imaging
title_short Time-Optimized High-Resolution Readout-Segmented Diffusion Tensor Imaging
title_sort time-optimized high-resolution readout-segmented diffusion tensor imaging
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3760803/
https://www.ncbi.nlm.nih.gov/pubmed/24019951
http://dx.doi.org/10.1371/journal.pone.0074156
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