Cargando…
Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment
The purpose of this study is to explore the changes in functional brain networks of AD patients using complex network theory. In this study, resting-state fMRI datasets of 10 AD patients and 11 healthy controls were collected. Time series of 90 brain regions were extracted from the fMRI datasets aft...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3760893/ https://www.ncbi.nlm.nih.gov/pubmed/24019905 http://dx.doi.org/10.1371/journal.pone.0073186 |
_version_ | 1782282815676612608 |
---|---|
author | Li, YaPeng Qin, Yuanyuan Chen, Xi Li, Wei |
author_facet | Li, YaPeng Qin, Yuanyuan Chen, Xi Li, Wei |
author_sort | Li, YaPeng |
collection | PubMed |
description | The purpose of this study is to explore the changes in functional brain networks of AD patients using complex network theory. In this study, resting-state fMRI datasets of 10 AD patients and 11 healthy controls were collected. Time series of 90 brain regions were extracted from the fMRI datasets after preprocessing. Pearson correlation method was used to calculate the correlation coefficient between any two time series. Then, a wide threshold range was selected to transform the adjacency matrix to a binary matrix under a different threshold. The topology parameters of each binary network were calculated, and all of them were then averaged within a group. During the evolution, node betweenness and the Euclidean distance between the nodes were set as control factors. Each binary network of healthy controls underwent evolution of 100 steps in accordance with the evolution rules. Then, the topology parameters of the evolution network were calculated. Finally, support vector machine (SVM) was used to classify the network topology parameters of the evolution network and to determine whether evolution results matched the datasets from AD patients. We found there were differing degrees of decline in global efficiency, clustering coefficient, number of edges and transitivity in AD patients compared with healthy controls. The topology parameters of the evolution network tended toward those of the AD group. The results of SVM classification of the evolution network show that the evolution network had a greater probability to be classified as an AD patients group. A new biological marker for diagnosis of AD was provided through comparison of topology parameters between AD patients and healthy controls. The study of network evolution strategies enriched the method of brain network evolution. The use of SVM to classify the results of network evolution provides an objective criteria for determining evolution results. |
format | Online Article Text |
id | pubmed-3760893 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-37608932013-09-09 Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment Li, YaPeng Qin, Yuanyuan Chen, Xi Li, Wei PLoS One Research Article The purpose of this study is to explore the changes in functional brain networks of AD patients using complex network theory. In this study, resting-state fMRI datasets of 10 AD patients and 11 healthy controls were collected. Time series of 90 brain regions were extracted from the fMRI datasets after preprocessing. Pearson correlation method was used to calculate the correlation coefficient between any two time series. Then, a wide threshold range was selected to transform the adjacency matrix to a binary matrix under a different threshold. The topology parameters of each binary network were calculated, and all of them were then averaged within a group. During the evolution, node betweenness and the Euclidean distance between the nodes were set as control factors. Each binary network of healthy controls underwent evolution of 100 steps in accordance with the evolution rules. Then, the topology parameters of the evolution network were calculated. Finally, support vector machine (SVM) was used to classify the network topology parameters of the evolution network and to determine whether evolution results matched the datasets from AD patients. We found there were differing degrees of decline in global efficiency, clustering coefficient, number of edges and transitivity in AD patients compared with healthy controls. The topology parameters of the evolution network tended toward those of the AD group. The results of SVM classification of the evolution network show that the evolution network had a greater probability to be classified as an AD patients group. A new biological marker for diagnosis of AD was provided through comparison of topology parameters between AD patients and healthy controls. The study of network evolution strategies enriched the method of brain network evolution. The use of SVM to classify the results of network evolution provides an objective criteria for determining evolution results. Public Library of Science 2013-09-03 /pmc/articles/PMC3760893/ /pubmed/24019905 http://dx.doi.org/10.1371/journal.pone.0073186 Text en © 2013 Yapeng et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Li, YaPeng Qin, Yuanyuan Chen, Xi Li, Wei Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment |
title | Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment |
title_full | Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment |
title_fullStr | Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment |
title_full_unstemmed | Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment |
title_short | Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment |
title_sort | exploring the functional brain network of alzheimer’s disease: based on the computational experiment |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3760893/ https://www.ncbi.nlm.nih.gov/pubmed/24019905 http://dx.doi.org/10.1371/journal.pone.0073186 |
work_keys_str_mv | AT liyapeng exploringthefunctionalbrainnetworkofalzheimersdiseasebasedonthecomputationalexperiment AT qinyuanyuan exploringthefunctionalbrainnetworkofalzheimersdiseasebasedonthecomputationalexperiment AT chenxi exploringthefunctionalbrainnetworkofalzheimersdiseasebasedonthecomputationalexperiment AT liwei exploringthefunctionalbrainnetworkofalzheimersdiseasebasedonthecomputationalexperiment |