Cargando…

Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment

The purpose of this study is to explore the changes in functional brain networks of AD patients using complex network theory. In this study, resting-state fMRI datasets of 10 AD patients and 11 healthy controls were collected. Time series of 90 brain regions were extracted from the fMRI datasets aft...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, YaPeng, Qin, Yuanyuan, Chen, Xi, Li, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3760893/
https://www.ncbi.nlm.nih.gov/pubmed/24019905
http://dx.doi.org/10.1371/journal.pone.0073186
_version_ 1782282815676612608
author Li, YaPeng
Qin, Yuanyuan
Chen, Xi
Li, Wei
author_facet Li, YaPeng
Qin, Yuanyuan
Chen, Xi
Li, Wei
author_sort Li, YaPeng
collection PubMed
description The purpose of this study is to explore the changes in functional brain networks of AD patients using complex network theory. In this study, resting-state fMRI datasets of 10 AD patients and 11 healthy controls were collected. Time series of 90 brain regions were extracted from the fMRI datasets after preprocessing. Pearson correlation method was used to calculate the correlation coefficient between any two time series. Then, a wide threshold range was selected to transform the adjacency matrix to a binary matrix under a different threshold. The topology parameters of each binary network were calculated, and all of them were then averaged within a group. During the evolution, node betweenness and the Euclidean distance between the nodes were set as control factors. Each binary network of healthy controls underwent evolution of 100 steps in accordance with the evolution rules. Then, the topology parameters of the evolution network were calculated. Finally, support vector machine (SVM) was used to classify the network topology parameters of the evolution network and to determine whether evolution results matched the datasets from AD patients. We found there were differing degrees of decline in global efficiency, clustering coefficient, number of edges and transitivity in AD patients compared with healthy controls. The topology parameters of the evolution network tended toward those of the AD group. The results of SVM classification of the evolution network show that the evolution network had a greater probability to be classified as an AD patients group. A new biological marker for diagnosis of AD was provided through comparison of topology parameters between AD patients and healthy controls. The study of network evolution strategies enriched the method of brain network evolution. The use of SVM to classify the results of network evolution provides an objective criteria for determining evolution results.
format Online
Article
Text
id pubmed-3760893
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-37608932013-09-09 Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment Li, YaPeng Qin, Yuanyuan Chen, Xi Li, Wei PLoS One Research Article The purpose of this study is to explore the changes in functional brain networks of AD patients using complex network theory. In this study, resting-state fMRI datasets of 10 AD patients and 11 healthy controls were collected. Time series of 90 brain regions were extracted from the fMRI datasets after preprocessing. Pearson correlation method was used to calculate the correlation coefficient between any two time series. Then, a wide threshold range was selected to transform the adjacency matrix to a binary matrix under a different threshold. The topology parameters of each binary network were calculated, and all of them were then averaged within a group. During the evolution, node betweenness and the Euclidean distance between the nodes were set as control factors. Each binary network of healthy controls underwent evolution of 100 steps in accordance with the evolution rules. Then, the topology parameters of the evolution network were calculated. Finally, support vector machine (SVM) was used to classify the network topology parameters of the evolution network and to determine whether evolution results matched the datasets from AD patients. We found there were differing degrees of decline in global efficiency, clustering coefficient, number of edges and transitivity in AD patients compared with healthy controls. The topology parameters of the evolution network tended toward those of the AD group. The results of SVM classification of the evolution network show that the evolution network had a greater probability to be classified as an AD patients group. A new biological marker for diagnosis of AD was provided through comparison of topology parameters between AD patients and healthy controls. The study of network evolution strategies enriched the method of brain network evolution. The use of SVM to classify the results of network evolution provides an objective criteria for determining evolution results. Public Library of Science 2013-09-03 /pmc/articles/PMC3760893/ /pubmed/24019905 http://dx.doi.org/10.1371/journal.pone.0073186 Text en © 2013 Yapeng et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Li, YaPeng
Qin, Yuanyuan
Chen, Xi
Li, Wei
Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment
title Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment
title_full Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment
title_fullStr Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment
title_full_unstemmed Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment
title_short Exploring the Functional Brain Network of Alzheimer’s Disease: Based on the Computational Experiment
title_sort exploring the functional brain network of alzheimer’s disease: based on the computational experiment
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3760893/
https://www.ncbi.nlm.nih.gov/pubmed/24019905
http://dx.doi.org/10.1371/journal.pone.0073186
work_keys_str_mv AT liyapeng exploringthefunctionalbrainnetworkofalzheimersdiseasebasedonthecomputationalexperiment
AT qinyuanyuan exploringthefunctionalbrainnetworkofalzheimersdiseasebasedonthecomputationalexperiment
AT chenxi exploringthefunctionalbrainnetworkofalzheimersdiseasebasedonthecomputationalexperiment
AT liwei exploringthefunctionalbrainnetworkofalzheimersdiseasebasedonthecomputationalexperiment