Cargando…

Functional Dissection of Regulatory Models Using Gene Expression Data of Deletion Mutants

Genome-wide gene expression profiles accumulate at an alarming rate, how to integrate these expression profiles generated by different laboratories to reverse engineer the cellular regulatory network has been a major challenge. To automatically infer gene regulatory pathways from genome-wide mRNA ex...

Descripción completa

Detalles Bibliográficos
Autores principales:	Li, Jin'e, Liu, Yi, Liu, Min, Han, Jing-Dong J.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2013
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3764135/ https://www.ncbi.nlm.nih.gov/pubmed/24039601 http://dx.doi.org/10.1371/journal.pgen.1003757

Ejemplares similares

Dissecting the regulatory architecture of gene expression QTLs
por: Gaffney, Daniel J, et al.
Publicado: (2012)

Detailed Dissection of the Chromosomal Region Containing the Ph1 Locus in Wheat Triticum aestivum: With Deletion Mutants and Expression Profiling
por: Al-Kaff, Nadia, et al.
Publicado: (2008)

Modular epistasis and the compensatory evolution of gene deletion mutants
por: Rojas Echenique, José I., et al.
Publicado: (2019)

Novel polyoxins generated by heterologously expressing polyoxin biosynthetic gene cluster in the sanN inactivated mutant of Streptomyces ansochromogenes
por: Li, Jine, et al.
Publicado: (2012)

HDAC10 deletion promotes Foxp3(+) T-regulatory cell function
por: Dahiya, Satinder, et al.
Publicado: (2020)

Inferring circadian gene regulatory relationships from gene expression data with a hybrid framework
por: Hu, Shuwen, et al.
Publicado: (2023)

In Vivo Expression of the PTB-deleted Odin Mutant Results in Hydrocephalus
por: Park, Sunjung, et al.
Publicado: (2015)

Dissection of Insertion–Deletion Variants within Differentially Expressed Genes Involved in Wood Formation in Populus
por: Gong, Chenrui, et al.
Publicado: (2018)

Data-driven modeling of core gene regulatory network underlying leukemogenesis in IDH mutant AML
por: Katebi, Ataur, et al.
Publicado: (2023)

Deletion of MtrA Inhibits Cellular Development of Streptomyces coelicolor and Alters Expression of Developmental Regulatory Genes
por: Zhang, Peipei, et al.
Publicado: (2017)

Dissecting the Regulatory Network of Maize Phase Change in ZmEPC1 Mutant by Transcriptome Analysis
por: Li, Xiaoqi, et al.
Publicado: (2022)

Functional CRISPR dissection of gene networks controlling human regulatory T cell identity
por: Schumann, Kathrin, et al.
Publicado: (2020)

Update on the Keio collection of Escherichia coli single-gene deletion mutants
por: Yamamoto, Natsuko, et al.
Publicado: (2009)

Learning About Gene Regulatory Networks From Gene Deletion Experiments
por: Schlitt, Thomas, et al.
Publicado: (2002)

Defined Single-Gene and Multi-Gene Deletion Mutant Collections in Salmonella enterica sv Typhimurium
por: Porwollik, Steffen, et al.
Publicado: (2014)

Whole genome HBV deletion profiles and the accumulation of preS deletion mutant during antiviral treatment
por: Zhang, Dake, et al.
Publicado: (2012)

Integrative dissection of gene regulatory elements at base resolution
por: Chen, Zeyu, et al.
Publicado: (2023)

An Efficient Strategy for Obtaining Mutants by Targeted Gene Deletion in Ophiostoma novo-ulmi
por: Sarmiento-Villamil, Jorge Luis, et al.
Publicado: (2021)

Practical Method for Isolation of Phage Deletion Mutants
por: Gutiérrez, Diana, et al.
Publicado: (2018)

Qualitative reasoning of dynamic gene regulatory interactions from gene expression data
por: Chen, Yu, et al.
Publicado: (2010)

Cariogenicity of Streptococcus mutans Glucan-Binding Protein Deletion Mutants
por: Lynch, David J, et al.
Publicado: (2013)

Reverse Engineering of Genome-wide Gene Regulatory Networks from Gene Expression Data
por: Liu, Zhi-Ping
Publicado: (2015)

Deletion of Socs3 Expression in Aortic Smooth Muscle Cells Ameliorates Aortic Dissection
por: Murphy, Michael P., et al.
Publicado: (2020)

Efficient isolation of mouse deletion mutant embryonic stem cells by CRISPR
por: Liu, Yuhan, et al.
Publicado: (2022)

Dissecting microregulation of a master regulatory network
por: Sinha, Amit U, et al.
Publicado: (2008)

High-throughput Methods for Dissection of Trypanosome Gene Regulatory Networks
por: Erben, Esteban D.
Publicado: (2018)

Molecular mechanism of mureidomycin biosynthesis activated by introduction of an exogenous regulatory gene ssaA into Streptomyces roseosporus
por: Liu, Ning, et al.
Publicado: (2021)

Regulatory Mechanism of MicroRNA-145 in the Pathogenesis of Acute Aortic Dissection
por: Li, Tianbo, et al.
Publicado: (2019)

Validating regulatory predictions from diverse bacteria with mutant fitness data
por: Sagawa, Shiori, et al.
Publicado: (2017)

A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1
por: de Berardinis, Véronique, et al.
Publicado: (2008)

Glyoxalase I Gene Deletion Mutants of Leishmania donovani Exhibit Reduced Methylglyoxal Detoxification
por: Chauhan, Swati C., et al.
Publicado: (2009)

Whole-Genome Sequences of Variants of Bacillus anthracis Sterne and Their Toxin Gene Deletion Mutants
por: Staab, A., et al.
Publicado: (2017)

An Exome-seq Based Tool for Mapping and Selection of Candidate Genes in Maize Deletion Mutants
por: Jia, Shangang, et al.
Publicado: (2018)

Label‐free proteomic dissection on dptP‐deletion mutant uncovers dptP involvement in strain growth and daptomycin tolerance of Streptomyces roseosporus
por: Zhang, Dan, et al.
Publicado: (2020)

A set of isogenic auxotrophic strains for constructing multiple gene deletion mutants and parasexual crossings in Aspergillus niger
por: Niu, Jing, et al.
Publicado: (2016)

Deletion Hotspots in AMACR Promoter CpG Island Are cis-Regulatory Elements Controlling the Gene Expression in the Colon
por: Zhang, Xiang, et al.
Publicado: (2009)

Accurate determination of causalities in gene regulatory networks by dissecting downstream target genes
por: Jia, Zhigang, et al.
Publicado: (2022)

A Soybean Deletion Mutant That Moderates the Repression of Flowering by Cool Temperatures
por: Zhang, Jingyu, et al.
Publicado: (2020)

Dissecting the sources of gene expression variation in a pan-cancer analysis identifies novel regulatory mutations
por: Sharma, Anchal, et al.
Publicado: (2018)

Integration of Gene Expression Profile Data to Verify Hub Genes of Patients with Stanford A Aortic Dissection
por: Wang, Weitie, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_h9hdsbku93ieudi0fe9shrncr5