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Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T))

Labrenzia alexandrii Biebl et al. 2007 is a marine member of the family Rhodobacteraceae in the order Rhodobacterales, which has thus far only partially been characterized at the genome level. The bacterium is of interest because it lives in close association with the toxic dinoflagellate Alexandriu...

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Autores principales: Fiebig, Anne, Pradella, Silke, Petersen, Jörn, Päuker, Orsola, Michael, Victoria, Lünsdorf, Heinrich, Göker, Markus, Klenk, Hans-Peter, Wagner-Döbler, Irene
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Michigan State University 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3764935/
https://www.ncbi.nlm.nih.gov/pubmed/24019989
http://dx.doi.org/10.4056/sigs.3456959
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author Fiebig, Anne
Pradella, Silke
Petersen, Jörn
Päuker, Orsola
Michael, Victoria
Lünsdorf, Heinrich
Göker, Markus
Klenk, Hans-Peter
Wagner-Döbler, Irene
author_facet Fiebig, Anne
Pradella, Silke
Petersen, Jörn
Päuker, Orsola
Michael, Victoria
Lünsdorf, Heinrich
Göker, Markus
Klenk, Hans-Peter
Wagner-Döbler, Irene
author_sort Fiebig, Anne
collection PubMed
description Labrenzia alexandrii Biebl et al. 2007 is a marine member of the family Rhodobacteraceae in the order Rhodobacterales, which has thus far only partially been characterized at the genome level. The bacterium is of interest because it lives in close association with the toxic dinoflagellate Alexandrium lusitanicum. Ultrastructural analysis reveals R-bodies within the bacterial cells, which are primarily known from obligate endosymbionts that trigger “killing traits” in ciliates (Paramecium spp.). Genomic traits of L. alexandrii DFL-11(T) are in accordance with these findings, as they include the reb genes putatively involved in R-body synthesis. Analysis of the two extrachromosomal elements suggests a role in heavy-metal resistance and exopolysaccharide formation, respectively. The 5,461,856 bp long genome with its 5,071 protein-coding and 73 RNA genes consists of one chromosome and two plasmids, and has been sequenced in the context of the Marine Microbial Initiative.
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spelling pubmed-37649352013-09-09 Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T)) Fiebig, Anne Pradella, Silke Petersen, Jörn Päuker, Orsola Michael, Victoria Lünsdorf, Heinrich Göker, Markus Klenk, Hans-Peter Wagner-Döbler, Irene Stand Genomic Sci Short Genome Reports Labrenzia alexandrii Biebl et al. 2007 is a marine member of the family Rhodobacteraceae in the order Rhodobacterales, which has thus far only partially been characterized at the genome level. The bacterium is of interest because it lives in close association with the toxic dinoflagellate Alexandrium lusitanicum. Ultrastructural analysis reveals R-bodies within the bacterial cells, which are primarily known from obligate endosymbionts that trigger “killing traits” in ciliates (Paramecium spp.). Genomic traits of L. alexandrii DFL-11(T) are in accordance with these findings, as they include the reb genes putatively involved in R-body synthesis. Analysis of the two extrachromosomal elements suggests a role in heavy-metal resistance and exopolysaccharide formation, respectively. The 5,461,856 bp long genome with its 5,071 protein-coding and 73 RNA genes consists of one chromosome and two plasmids, and has been sequenced in the context of the Marine Microbial Initiative. Michigan State University 2013-02-25 /pmc/articles/PMC3764935/ /pubmed/24019989 http://dx.doi.org/10.4056/sigs.3456959 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Fiebig, Anne
Pradella, Silke
Petersen, Jörn
Päuker, Orsola
Michael, Victoria
Lünsdorf, Heinrich
Göker, Markus
Klenk, Hans-Peter
Wagner-Döbler, Irene
Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T))
title Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T))
title_full Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T))
title_fullStr Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T))
title_full_unstemmed Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T))
title_short Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T))
title_sort genome of the r-body producing marine alphaproteobacterium labrenzia alexandrii type strain (dfl-11(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3764935/
https://www.ncbi.nlm.nih.gov/pubmed/24019989
http://dx.doi.org/10.4056/sigs.3456959
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