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Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T))
Labrenzia alexandrii Biebl et al. 2007 is a marine member of the family Rhodobacteraceae in the order Rhodobacterales, which has thus far only partially been characterized at the genome level. The bacterium is of interest because it lives in close association with the toxic dinoflagellate Alexandriu...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Michigan State University
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3764935/ https://www.ncbi.nlm.nih.gov/pubmed/24019989 http://dx.doi.org/10.4056/sigs.3456959 |
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author | Fiebig, Anne Pradella, Silke Petersen, Jörn Päuker, Orsola Michael, Victoria Lünsdorf, Heinrich Göker, Markus Klenk, Hans-Peter Wagner-Döbler, Irene |
author_facet | Fiebig, Anne Pradella, Silke Petersen, Jörn Päuker, Orsola Michael, Victoria Lünsdorf, Heinrich Göker, Markus Klenk, Hans-Peter Wagner-Döbler, Irene |
author_sort | Fiebig, Anne |
collection | PubMed |
description | Labrenzia alexandrii Biebl et al. 2007 is a marine member of the family Rhodobacteraceae in the order Rhodobacterales, which has thus far only partially been characterized at the genome level. The bacterium is of interest because it lives in close association with the toxic dinoflagellate Alexandrium lusitanicum. Ultrastructural analysis reveals R-bodies within the bacterial cells, which are primarily known from obligate endosymbionts that trigger “killing traits” in ciliates (Paramecium spp.). Genomic traits of L. alexandrii DFL-11(T) are in accordance with these findings, as they include the reb genes putatively involved in R-body synthesis. Analysis of the two extrachromosomal elements suggests a role in heavy-metal resistance and exopolysaccharide formation, respectively. The 5,461,856 bp long genome with its 5,071 protein-coding and 73 RNA genes consists of one chromosome and two plasmids, and has been sequenced in the context of the Marine Microbial Initiative. |
format | Online Article Text |
id | pubmed-3764935 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-37649352013-09-09 Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T)) Fiebig, Anne Pradella, Silke Petersen, Jörn Päuker, Orsola Michael, Victoria Lünsdorf, Heinrich Göker, Markus Klenk, Hans-Peter Wagner-Döbler, Irene Stand Genomic Sci Short Genome Reports Labrenzia alexandrii Biebl et al. 2007 is a marine member of the family Rhodobacteraceae in the order Rhodobacterales, which has thus far only partially been characterized at the genome level. The bacterium is of interest because it lives in close association with the toxic dinoflagellate Alexandrium lusitanicum. Ultrastructural analysis reveals R-bodies within the bacterial cells, which are primarily known from obligate endosymbionts that trigger “killing traits” in ciliates (Paramecium spp.). Genomic traits of L. alexandrii DFL-11(T) are in accordance with these findings, as they include the reb genes putatively involved in R-body synthesis. Analysis of the two extrachromosomal elements suggests a role in heavy-metal resistance and exopolysaccharide formation, respectively. The 5,461,856 bp long genome with its 5,071 protein-coding and 73 RNA genes consists of one chromosome and two plasmids, and has been sequenced in the context of the Marine Microbial Initiative. Michigan State University 2013-02-25 /pmc/articles/PMC3764935/ /pubmed/24019989 http://dx.doi.org/10.4056/sigs.3456959 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Fiebig, Anne Pradella, Silke Petersen, Jörn Päuker, Orsola Michael, Victoria Lünsdorf, Heinrich Göker, Markus Klenk, Hans-Peter Wagner-Döbler, Irene Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T)) |
title | Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T)) |
title_full | Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T)) |
title_fullStr | Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T)) |
title_full_unstemmed | Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T)) |
title_short | Genome of the R-body producing marine alphaproteobacterium Labrenzia alexandrii type strain (DFL-11(T)) |
title_sort | genome of the r-body producing marine alphaproteobacterium labrenzia alexandrii type strain (dfl-11(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3764935/ https://www.ncbi.nlm.nih.gov/pubmed/24019989 http://dx.doi.org/10.4056/sigs.3456959 |
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