Cargando…
Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations
Nitrosomonas sp. Is79 is a chemolithoautotrophic ammonia-oxidizing bacterium that belongs to the family Nitrosomonadaceae within the phylum Proteobacteria. Ammonia oxidation is the first step of nitrification, an important process in the global nitrogen cycle ultimately resulting in the production o...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
|---|---|
| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Michigan State University
2013
|
| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3764937/ https://www.ncbi.nlm.nih.gov/pubmed/24019993 http://dx.doi.org/10.4056/sigs.3517166 |
| _version_ | 1782283207872348160 |
|---|---|
| author | Bollmann, Annette Sedlacek, Christopher J. Norton, Jeanette Laanbroek, Hendrikus J. Suwa, Yuichi Stein, Lisa Y. Klotz, Martin G. Arp, Daniel Sayavedra-Soto, Luis Lu, Megan Bruce, David Detter, Chris Tapia, Roxanne Han, James Woyke, Tanja Lucas, Susan M. Pitluck, Sam Pennacchio, Len Nolan, Matt Land, Miriam L. Huntemann, Marcel Deshpande, Shweta Han, Cliff Chen, Amy Kyrpides, Nikos Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Mikhailova, Natalia Pagani, Ioanna Pati, Amrita Peters, Lin Ovchinnikova, Galina Goodwin, Lynne A. |
| author_facet | Bollmann, Annette Sedlacek, Christopher J. Norton, Jeanette Laanbroek, Hendrikus J. Suwa, Yuichi Stein, Lisa Y. Klotz, Martin G. Arp, Daniel Sayavedra-Soto, Luis Lu, Megan Bruce, David Detter, Chris Tapia, Roxanne Han, James Woyke, Tanja Lucas, Susan M. Pitluck, Sam Pennacchio, Len Nolan, Matt Land, Miriam L. Huntemann, Marcel Deshpande, Shweta Han, Cliff Chen, Amy Kyrpides, Nikos Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Mikhailova, Natalia Pagani, Ioanna Pati, Amrita Peters, Lin Ovchinnikova, Galina Goodwin, Lynne A. |
| author_sort | Bollmann, Annette |
| collection | PubMed |
| description | Nitrosomonas sp. Is79 is a chemolithoautotrophic ammonia-oxidizing bacterium that belongs to the family Nitrosomonadaceae within the phylum Proteobacteria. Ammonia oxidation is the first step of nitrification, an important process in the global nitrogen cycle ultimately resulting in the production of nitrate. Nitrosomonas sp. Is79 is an ammonia oxidizer of high interest because it is adapted to low ammonium and can be found in freshwater environments around the world. The 3,783,444-bp chromosome with a total of 3,553 protein coding genes and 44 RNA genes was sequenced by the DOE-Joint Genome Institute Program CSP 2006. |
| format | Online Article Text |
| id | pubmed-3764937 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2013 |
| publisher | Michigan State University |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-37649372013-09-09 Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations Bollmann, Annette Sedlacek, Christopher J. Norton, Jeanette Laanbroek, Hendrikus J. Suwa, Yuichi Stein, Lisa Y. Klotz, Martin G. Arp, Daniel Sayavedra-Soto, Luis Lu, Megan Bruce, David Detter, Chris Tapia, Roxanne Han, James Woyke, Tanja Lucas, Susan M. Pitluck, Sam Pennacchio, Len Nolan, Matt Land, Miriam L. Huntemann, Marcel Deshpande, Shweta Han, Cliff Chen, Amy Kyrpides, Nikos Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Mikhailova, Natalia Pagani, Ioanna Pati, Amrita Peters, Lin Ovchinnikova, Galina Goodwin, Lynne A. Stand Genomic Sci Short Genome Reports Nitrosomonas sp. Is79 is a chemolithoautotrophic ammonia-oxidizing bacterium that belongs to the family Nitrosomonadaceae within the phylum Proteobacteria. Ammonia oxidation is the first step of nitrification, an important process in the global nitrogen cycle ultimately resulting in the production of nitrate. Nitrosomonas sp. Is79 is an ammonia oxidizer of high interest because it is adapted to low ammonium and can be found in freshwater environments around the world. The 3,783,444-bp chromosome with a total of 3,553 protein coding genes and 44 RNA genes was sequenced by the DOE-Joint Genome Institute Program CSP 2006. Michigan State University 2013-02-25 /pmc/articles/PMC3764937/ /pubmed/24019993 http://dx.doi.org/10.4056/sigs.3517166 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
| spellingShingle | Short Genome Reports Bollmann, Annette Sedlacek, Christopher J. Norton, Jeanette Laanbroek, Hendrikus J. Suwa, Yuichi Stein, Lisa Y. Klotz, Martin G. Arp, Daniel Sayavedra-Soto, Luis Lu, Megan Bruce, David Detter, Chris Tapia, Roxanne Han, James Woyke, Tanja Lucas, Susan M. Pitluck, Sam Pennacchio, Len Nolan, Matt Land, Miriam L. Huntemann, Marcel Deshpande, Shweta Han, Cliff Chen, Amy Kyrpides, Nikos Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Mikhailova, Natalia Pagani, Ioanna Pati, Amrita Peters, Lin Ovchinnikova, Galina Goodwin, Lynne A. Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations |
| title | Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations |
| title_full | Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations |
| title_fullStr | Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations |
| title_full_unstemmed | Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations |
| title_short | Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations |
| title_sort | complete genome sequence of nitrosomonas sp. is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations |
| topic | Short Genome Reports |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3764937/ https://www.ncbi.nlm.nih.gov/pubmed/24019993 http://dx.doi.org/10.4056/sigs.3517166 |
| work_keys_str_mv | AT bollmannannette completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT sedlacekchristopherj completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT nortonjeanette completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT laanbroekhendrikusj completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT suwayuichi completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT steinlisay completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT klotzmarting completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT arpdaniel completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT sayavedrasotoluis completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT lumegan completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT brucedavid completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT detterchris completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT tapiaroxanne completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT hanjames completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT woyketanja completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT lucassusanm completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT pitlucksam completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT pennacchiolen completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT nolanmatt completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT landmiriaml completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT huntemannmarcel completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT deshpandeshweta completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT hancliff completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT chenamy completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT kyrpidesnikos completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT mavromatiskonstantinos completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT markowitzvictor completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT szetoernest completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT ivanovanatalia completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT mikhailovanatalia completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT paganiioanna completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT patiamrita completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT peterslin completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT ovchinnikovagalina completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations AT goodwinlynnea completegenomesequenceofnitrosomonasspis79anammoniaoxidizingbacteriumadaptedtolowammoniumconcentrations |