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LeView: automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions
2D diagrams are widely used in the scientific literature to represent interactions between ligands and biomacromolecules. Such schematic diagrams are very helpful to better understand the chemical interactions and biological processes in which ligands are involved. Here, a new tool for automatic and...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2013
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3765711/ https://www.ncbi.nlm.nih.gov/pubmed/23988161 http://dx.doi.org/10.1186/1758-2946-5-40 |
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author | Caboche, Ségolène |
author_facet | Caboche, Ségolène |
author_sort | Caboche, Ségolène |
collection | PubMed |
description | 2D diagrams are widely used in the scientific literature to represent interactions between ligands and biomacromolecules. Such schematic diagrams are very helpful to better understand the chemical interactions and biological processes in which ligands are involved. Here, a new tool for automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions is presented. LeView (Ligand-Environment Viewer) produces customised and high-quality figures, with a good compromise between a faithful representation of the 3D data (structures and interactions) and aesthetic criteria. LeView can be freely downloaded at http://www.pegase-biosciences.com/tools/leview/. |
format | Online Article Text |
id | pubmed-3765711 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-37657112013-09-08 LeView: automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions Caboche, Ségolène J Cheminform Software 2D diagrams are widely used in the scientific literature to represent interactions between ligands and biomacromolecules. Such schematic diagrams are very helpful to better understand the chemical interactions and biological processes in which ligands are involved. Here, a new tool for automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions is presented. LeView (Ligand-Environment Viewer) produces customised and high-quality figures, with a good compromise between a faithful representation of the 3D data (structures and interactions) and aesthetic criteria. LeView can be freely downloaded at http://www.pegase-biosciences.com/tools/leview/. BioMed Central 2013-08-29 /pmc/articles/PMC3765711/ /pubmed/23988161 http://dx.doi.org/10.1186/1758-2946-5-40 Text en Copyright © 2013 Caboche; licensee Chemistry Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Software Caboche, Ségolène LeView: automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions |
title | LeView: automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions |
title_full | LeView: automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions |
title_fullStr | LeView: automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions |
title_full_unstemmed | LeView: automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions |
title_short | LeView: automatic and interactive generation of 2D diagrams for biomacromolecule/ligand interactions |
title_sort | leview: automatic and interactive generation of 2d diagrams for biomacromolecule/ligand interactions |
topic | Software |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3765711/ https://www.ncbi.nlm.nih.gov/pubmed/23988161 http://dx.doi.org/10.1186/1758-2946-5-40 |
work_keys_str_mv | AT cabochesegolene leviewautomaticandinteractivegenerationof2ddiagramsforbiomacromoleculeligandinteractions |