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Targeted Biomarker Discovery by High Throughput Glycosylation Profiling of Human Plasma Alpha1-Antitrypsin and Immunoglobulin A

Protein N-glycosylation patterns are known to show vast genetic as well as physiological and pathological variation and represent a large pool of potential biomarkers. Large-scale studies are needed for the identification and validation of biomarkers, and the analytical techniques required have rece...

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Autores principales: Ruhaak, L. Renee, Koeleman, Carolien A. M., Uh, Hae-Won, Stam, Jord C., van Heemst, Diana, Maier, Andrea B., Houwing-Duistermaat, Jeanine J., Hensbergen, Paul J., Slagboom, P. Eline, Deelder, André M., Wuhrer, Manfred
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3767703/
https://www.ncbi.nlm.nih.gov/pubmed/24039863
http://dx.doi.org/10.1371/journal.pone.0073082
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author Ruhaak, L. Renee
Koeleman, Carolien A. M.
Uh, Hae-Won
Stam, Jord C.
van Heemst, Diana
Maier, Andrea B.
Houwing-Duistermaat, Jeanine J.
Hensbergen, Paul J.
Slagboom, P. Eline
Deelder, André M.
Wuhrer, Manfred
author_facet Ruhaak, L. Renee
Koeleman, Carolien A. M.
Uh, Hae-Won
Stam, Jord C.
van Heemst, Diana
Maier, Andrea B.
Houwing-Duistermaat, Jeanine J.
Hensbergen, Paul J.
Slagboom, P. Eline
Deelder, André M.
Wuhrer, Manfred
author_sort Ruhaak, L. Renee
collection PubMed
description Protein N-glycosylation patterns are known to show vast genetic as well as physiological and pathological variation and represent a large pool of potential biomarkers. Large-scale studies are needed for the identification and validation of biomarkers, and the analytical techniques required have recently been developed. Such methods have up to now mainly been applied to complex mixtures of glycoproteins in biofluids (e.g. plasma). Here, we analyzed N-glycosylation profiles of alpha1-antitrypsin (AAT) and immunoglobulin A (IgA) enriched fractions by 96-well microtitration plate based high-throughput immuno-affinity capturing and N-glycan analysis using multiplexed capillary gel electrophoresis with laser-induced fluorescence detection (CGE-LIF). Human plasma samples were from the Leiden Longevity Study comprising 2415 participants of different chronological and biological ages. Glycosylation patterns of AAT enriched fractions were found to be associated with chronological (calendar) age and they differed between females and males. Moreover, several glycans in the AAT enriched fraction were associated with physiological parameters marking cardiovascular and metabolic diseases. Pronounced differences were found between males and females in the glycosylation profiles of IgA enriched fractions. Our results demonstrate that large-scale immuno-affinity capturing of proteins from human plasma using a bead-based method combined with high-throughput N-glycan analysis is a powerful tool for the discovery of glycosylation-based biomarker candidates.
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spelling pubmed-37677032013-09-13 Targeted Biomarker Discovery by High Throughput Glycosylation Profiling of Human Plasma Alpha1-Antitrypsin and Immunoglobulin A Ruhaak, L. Renee Koeleman, Carolien A. M. Uh, Hae-Won Stam, Jord C. van Heemst, Diana Maier, Andrea B. Houwing-Duistermaat, Jeanine J. Hensbergen, Paul J. Slagboom, P. Eline Deelder, André M. Wuhrer, Manfred PLoS One Research Article Protein N-glycosylation patterns are known to show vast genetic as well as physiological and pathological variation and represent a large pool of potential biomarkers. Large-scale studies are needed for the identification and validation of biomarkers, and the analytical techniques required have recently been developed. Such methods have up to now mainly been applied to complex mixtures of glycoproteins in biofluids (e.g. plasma). Here, we analyzed N-glycosylation profiles of alpha1-antitrypsin (AAT) and immunoglobulin A (IgA) enriched fractions by 96-well microtitration plate based high-throughput immuno-affinity capturing and N-glycan analysis using multiplexed capillary gel electrophoresis with laser-induced fluorescence detection (CGE-LIF). Human plasma samples were from the Leiden Longevity Study comprising 2415 participants of different chronological and biological ages. Glycosylation patterns of AAT enriched fractions were found to be associated with chronological (calendar) age and they differed between females and males. Moreover, several glycans in the AAT enriched fraction were associated with physiological parameters marking cardiovascular and metabolic diseases. Pronounced differences were found between males and females in the glycosylation profiles of IgA enriched fractions. Our results demonstrate that large-scale immuno-affinity capturing of proteins from human plasma using a bead-based method combined with high-throughput N-glycan analysis is a powerful tool for the discovery of glycosylation-based biomarker candidates. Public Library of Science 2013-09-09 /pmc/articles/PMC3767703/ /pubmed/24039863 http://dx.doi.org/10.1371/journal.pone.0073082 Text en © 2013 Ruhaak et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Ruhaak, L. Renee
Koeleman, Carolien A. M.
Uh, Hae-Won
Stam, Jord C.
van Heemst, Diana
Maier, Andrea B.
Houwing-Duistermaat, Jeanine J.
Hensbergen, Paul J.
Slagboom, P. Eline
Deelder, André M.
Wuhrer, Manfred
Targeted Biomarker Discovery by High Throughput Glycosylation Profiling of Human Plasma Alpha1-Antitrypsin and Immunoglobulin A
title Targeted Biomarker Discovery by High Throughput Glycosylation Profiling of Human Plasma Alpha1-Antitrypsin and Immunoglobulin A
title_full Targeted Biomarker Discovery by High Throughput Glycosylation Profiling of Human Plasma Alpha1-Antitrypsin and Immunoglobulin A
title_fullStr Targeted Biomarker Discovery by High Throughput Glycosylation Profiling of Human Plasma Alpha1-Antitrypsin and Immunoglobulin A
title_full_unstemmed Targeted Biomarker Discovery by High Throughput Glycosylation Profiling of Human Plasma Alpha1-Antitrypsin and Immunoglobulin A
title_short Targeted Biomarker Discovery by High Throughput Glycosylation Profiling of Human Plasma Alpha1-Antitrypsin and Immunoglobulin A
title_sort targeted biomarker discovery by high throughput glycosylation profiling of human plasma alpha1-antitrypsin and immunoglobulin a
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3767703/
https://www.ncbi.nlm.nih.gov/pubmed/24039863
http://dx.doi.org/10.1371/journal.pone.0073082
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