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A simple and efficient diffusion technique for assay of endo β-1,4-xylanase activity

Endo-β-1, 4-xylanases is thought to be of great significance for several industries namely paper, pharmaceuticals, food, feed etc. in addition to better utilization of lignocellulosic biomass. The present investigation was aimed to develop an easy, simple and efficient assay technique for endo-β-1,...

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Autores principales: Samanta, A.K., Kolte, Atul P., Senani, S., Sridhar, Manpal., Jayapal, Natasha.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Microbiologia 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3768722/
https://www.ncbi.nlm.nih.gov/pubmed/24031763
http://dx.doi.org/10.1590/S1517-838220110004000016
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author Samanta, A.K.
Kolte, Atul P.
Senani, S.
Sridhar, Manpal.
Jayapal, Natasha.
author_facet Samanta, A.K.
Kolte, Atul P.
Senani, S.
Sridhar, Manpal.
Jayapal, Natasha.
author_sort Samanta, A.K.
collection PubMed
description Endo-β-1, 4-xylanases is thought to be of great significance for several industries namely paper, pharmaceuticals, food, feed etc. in addition to better utilization of lignocellulosic biomass. The present investigation was aimed to develop an easy, simple and efficient assay technique for endo-β-1, 4-xylanases secreted by the aerobic fungi. Under the proposed protocol, 9 g/L xylan containing agar was prepared in 100 mM phosphate buffer at different pH (4.5, 5.5 and 6.5). The sterilized xylan agar was dispensed in 90 mm petri dishes. 100 µl of culture supernatant of 12 fungal isolates was added to the wells and left overnight at 31±1(0)C. The petri dishes were observed for zone of clearance by naked eye and diameter was measured. Congo red solution (1 g/L) was applied over the petri dishes as per the established protocol and thereafter plates were flooded with 1M Sodium chloride solution for the appearance of zone of clearance. The diameter for zone of clearance by the proposed method and the established protocol was almost identical and ranged from 21 to 42 mm at different pH depending upon the activity of endo-β-1, 4-xylanases. Change of pH towards alkaline side enabled similar or marginal decrease of diameter for the zone of clearance in most of the fungal isolates. The specific activities of these fungal isolates varied from 1.85 to 11.47 IU/mg protein. The present investigation revealed that the proposed simple diffusion technique gave similar results as compared to the established Congo red assay for endo-β-1, 4-xylanases. Moreover, the present technique avoided the cumbersome steps of staining by Congo red and de-staining by sodium chloride.
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spelling pubmed-37687222013-09-12 A simple and efficient diffusion technique for assay of endo β-1,4-xylanase activity Samanta, A.K. Kolte, Atul P. Senani, S. Sridhar, Manpal. Jayapal, Natasha. Braz J Microbiol Medical Microbiology Endo-β-1, 4-xylanases is thought to be of great significance for several industries namely paper, pharmaceuticals, food, feed etc. in addition to better utilization of lignocellulosic biomass. The present investigation was aimed to develop an easy, simple and efficient assay technique for endo-β-1, 4-xylanases secreted by the aerobic fungi. Under the proposed protocol, 9 g/L xylan containing agar was prepared in 100 mM phosphate buffer at different pH (4.5, 5.5 and 6.5). The sterilized xylan agar was dispensed in 90 mm petri dishes. 100 µl of culture supernatant of 12 fungal isolates was added to the wells and left overnight at 31±1(0)C. The petri dishes were observed for zone of clearance by naked eye and diameter was measured. Congo red solution (1 g/L) was applied over the petri dishes as per the established protocol and thereafter plates were flooded with 1M Sodium chloride solution for the appearance of zone of clearance. The diameter for zone of clearance by the proposed method and the established protocol was almost identical and ranged from 21 to 42 mm at different pH depending upon the activity of endo-β-1, 4-xylanases. Change of pH towards alkaline side enabled similar or marginal decrease of diameter for the zone of clearance in most of the fungal isolates. The specific activities of these fungal isolates varied from 1.85 to 11.47 IU/mg protein. The present investigation revealed that the proposed simple diffusion technique gave similar results as compared to the established Congo red assay for endo-β-1, 4-xylanases. Moreover, the present technique avoided the cumbersome steps of staining by Congo red and de-staining by sodium chloride. Sociedade Brasileira de Microbiologia 2011 2011-12-01 /pmc/articles/PMC3768722/ /pubmed/24031763 http://dx.doi.org/10.1590/S1517-838220110004000016 Text en © Sociedade Brasileira de Microbiologia http://creativecommons.org/licenses/by-nc/3.0/ All the content of the journal, except where otherwise noted, is licensed under a Creative Commons License
spellingShingle Medical Microbiology
Samanta, A.K.
Kolte, Atul P.
Senani, S.
Sridhar, Manpal.
Jayapal, Natasha.
A simple and efficient diffusion technique for assay of endo β-1,4-xylanase activity
title A simple and efficient diffusion technique for assay of endo β-1,4-xylanase activity
title_full A simple and efficient diffusion technique for assay of endo β-1,4-xylanase activity
title_fullStr A simple and efficient diffusion technique for assay of endo β-1,4-xylanase activity
title_full_unstemmed A simple and efficient diffusion technique for assay of endo β-1,4-xylanase activity
title_short A simple and efficient diffusion technique for assay of endo β-1,4-xylanase activity
title_sort simple and efficient diffusion technique for assay of endo β-1,4-xylanase activity
topic Medical Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3768722/
https://www.ncbi.nlm.nih.gov/pubmed/24031763
http://dx.doi.org/10.1590/S1517-838220110004000016
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