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Pseudorabies virus can be classified into five genotypes using partial sequences of UL44
Suid herpesvirus 1 (SuHV-1) is the causative agent of pseudorabies (PR), a disease of great importance due to the huge losses it causes in the swine industry. The aim of this study was to determine a method for genotyping SuHV-1 based on partial sequences of the gene coding for glycoprotein C (gC) a...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Sociedade Brasileira de Microbiologia
2012
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3769038/ https://www.ncbi.nlm.nih.gov/pubmed/24031995 http://dx.doi.org/10.1590/S1517-838220120004000048 |
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author | Fonseca Jr., A. A. Camargos, M. F. Sales, M. L. Heinemann, M. B. Leite, R.C. Reis, J. K. P. |
author_facet | Fonseca Jr., A. A. Camargos, M. F. Sales, M. L. Heinemann, M. B. Leite, R.C. Reis, J. K. P. |
author_sort | Fonseca Jr., A. A. |
collection | PubMed |
description | Suid herpesvirus 1 (SuHV-1) is the causative agent of pseudorabies (PR), a disease of great importance due to the huge losses it causes in the swine industry. The aim of this study was to determine a method for genotyping SuHV-1 based on partial sequences of the gene coding for glycoprotein C (gC) and to elucidate the possible reasons for the variability of this region. A total of 109 gCsequences collected from GenBank were divided into five major groups after reconstruction of a phylogenetic tree by Bayesian inference. The analysis showed that a portion of gC (approximately 671 bp) is under selective pressure at various points that coincide with regions of protein disorder. It was also possible to divide SuHV-1 into five genotypes that evolved under different selective pressures. These genotypes are not specific to countries or continents, perhaps due to multiple introduction events related to the importation of swine. |
format | Online Article Text |
id | pubmed-3769038 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2012 |
publisher | Sociedade Brasileira de Microbiologia |
record_format | MEDLINE/PubMed |
spelling | pubmed-37690382013-09-12 Pseudorabies virus can be classified into five genotypes using partial sequences of UL44 Fonseca Jr., A. A. Camargos, M. F. Sales, M. L. Heinemann, M. B. Leite, R.C. Reis, J. K. P. Braz J Microbiol Genetics and Molecular Microbiology Suid herpesvirus 1 (SuHV-1) is the causative agent of pseudorabies (PR), a disease of great importance due to the huge losses it causes in the swine industry. The aim of this study was to determine a method for genotyping SuHV-1 based on partial sequences of the gene coding for glycoprotein C (gC) and to elucidate the possible reasons for the variability of this region. A total of 109 gCsequences collected from GenBank were divided into five major groups after reconstruction of a phylogenetic tree by Bayesian inference. The analysis showed that a portion of gC (approximately 671 bp) is under selective pressure at various points that coincide with regions of protein disorder. It was also possible to divide SuHV-1 into five genotypes that evolved under different selective pressures. These genotypes are not specific to countries or continents, perhaps due to multiple introduction events related to the importation of swine. Sociedade Brasileira de Microbiologia 2012 2012-06-01 /pmc/articles/PMC3769038/ /pubmed/24031995 http://dx.doi.org/10.1590/S1517-838220120004000048 Text en © Sociedade Brasileira de Microbiologia http://creativecommons.org/licenses/by-nc/3.0/ All the content of the journal, except where otherwise noted, is licensed under a Creative Commons License |
spellingShingle | Genetics and Molecular Microbiology Fonseca Jr., A. A. Camargos, M. F. Sales, M. L. Heinemann, M. B. Leite, R.C. Reis, J. K. P. Pseudorabies virus can be classified into five genotypes using partial sequences of UL44 |
title | Pseudorabies virus can be classified into five genotypes using partial sequences of UL44 |
title_full | Pseudorabies virus can be classified into five genotypes using partial sequences of UL44 |
title_fullStr | Pseudorabies virus can be classified into five genotypes using partial sequences of UL44 |
title_full_unstemmed | Pseudorabies virus can be classified into five genotypes using partial sequences of UL44 |
title_short | Pseudorabies virus can be classified into five genotypes using partial sequences of UL44 |
title_sort | pseudorabies virus can be classified into five genotypes using partial sequences of ul44 |
topic | Genetics and Molecular Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3769038/ https://www.ncbi.nlm.nih.gov/pubmed/24031995 http://dx.doi.org/10.1590/S1517-838220120004000048 |
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