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Best practices in bioinformatics training for life scientists

The mountains of data thrusting from the new landscape of modern high-throughput biology are irrevocably changing biomedical research and creating a near-insatiable demand for training in data management and manipulation and data mining and analysis. Among life scientists, from clinicians to environ...

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Autores principales: Via, Allegra, Blicher, Thomas, Bongcam-Rudloff, Erik, Brazas, Michelle D., Brooksbank, Cath, Budd, Aidan, De Las Rivas, Javier, Dreyer, Jacqueline, Fernandes, Pedro L., van Gelder, Celia, Jacob, Joachim, Jimenez, Rafael C., Loveland, Jane, Moran, Federico, Mulder, Nicola, Nyrönen, Tommi, Rother, Kristian, Schneider, Maria Victoria, Attwood, Teresa K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3771230/
https://www.ncbi.nlm.nih.gov/pubmed/23803301
http://dx.doi.org/10.1093/bib/bbt043
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author Via, Allegra
Blicher, Thomas
Bongcam-Rudloff, Erik
Brazas, Michelle D.
Brooksbank, Cath
Budd, Aidan
De Las Rivas, Javier
Dreyer, Jacqueline
Fernandes, Pedro L.
van Gelder, Celia
Jacob, Joachim
Jimenez, Rafael C.
Loveland, Jane
Moran, Federico
Mulder, Nicola
Nyrönen, Tommi
Rother, Kristian
Schneider, Maria Victoria
Attwood, Teresa K.
author_facet Via, Allegra
Blicher, Thomas
Bongcam-Rudloff, Erik
Brazas, Michelle D.
Brooksbank, Cath
Budd, Aidan
De Las Rivas, Javier
Dreyer, Jacqueline
Fernandes, Pedro L.
van Gelder, Celia
Jacob, Joachim
Jimenez, Rafael C.
Loveland, Jane
Moran, Federico
Mulder, Nicola
Nyrönen, Tommi
Rother, Kristian
Schneider, Maria Victoria
Attwood, Teresa K.
author_sort Via, Allegra
collection PubMed
description The mountains of data thrusting from the new landscape of modern high-throughput biology are irrevocably changing biomedical research and creating a near-insatiable demand for training in data management and manipulation and data mining and analysis. Among life scientists, from clinicians to environmental researchers, a common theme is the need not just to use, and gain familiarity with, bioinformatics tools and resources but also to understand their underlying fundamental theoretical and practical concepts. Providing bioinformatics training to empower life scientists to handle and analyse their data efficiently, and progress their research, is a challenge across the globe. Delivering good training goes beyond traditional lectures and resource-centric demos, using interactivity, problem-solving exercises and cooperative learning to substantially enhance training quality and learning outcomes. In this context, this article discusses various pragmatic criteria for identifying training needs and learning objectives, for selecting suitable trainees and trainers, for developing and maintaining training skills and evaluating training quality. Adherence to these criteria may help not only to guide course organizers and trainers on the path towards bioinformatics training excellence but, importantly, also to improve the training experience for life scientists.
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spelling pubmed-37712302013-09-12 Best practices in bioinformatics training for life scientists Via, Allegra Blicher, Thomas Bongcam-Rudloff, Erik Brazas, Michelle D. Brooksbank, Cath Budd, Aidan De Las Rivas, Javier Dreyer, Jacqueline Fernandes, Pedro L. van Gelder, Celia Jacob, Joachim Jimenez, Rafael C. Loveland, Jane Moran, Federico Mulder, Nicola Nyrönen, Tommi Rother, Kristian Schneider, Maria Victoria Attwood, Teresa K. Brief Bioinform Papers The mountains of data thrusting from the new landscape of modern high-throughput biology are irrevocably changing biomedical research and creating a near-insatiable demand for training in data management and manipulation and data mining and analysis. Among life scientists, from clinicians to environmental researchers, a common theme is the need not just to use, and gain familiarity with, bioinformatics tools and resources but also to understand their underlying fundamental theoretical and practical concepts. Providing bioinformatics training to empower life scientists to handle and analyse their data efficiently, and progress their research, is a challenge across the globe. Delivering good training goes beyond traditional lectures and resource-centric demos, using interactivity, problem-solving exercises and cooperative learning to substantially enhance training quality and learning outcomes. In this context, this article discusses various pragmatic criteria for identifying training needs and learning objectives, for selecting suitable trainees and trainers, for developing and maintaining training skills and evaluating training quality. Adherence to these criteria may help not only to guide course organizers and trainers on the path towards bioinformatics training excellence but, importantly, also to improve the training experience for life scientists. Oxford University Press 2013-09 2013-06-25 /pmc/articles/PMC3771230/ /pubmed/23803301 http://dx.doi.org/10.1093/bib/bbt043 Text en © The Author 2013. Published by Oxford University Press. http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Papers
Via, Allegra
Blicher, Thomas
Bongcam-Rudloff, Erik
Brazas, Michelle D.
Brooksbank, Cath
Budd, Aidan
De Las Rivas, Javier
Dreyer, Jacqueline
Fernandes, Pedro L.
van Gelder, Celia
Jacob, Joachim
Jimenez, Rafael C.
Loveland, Jane
Moran, Federico
Mulder, Nicola
Nyrönen, Tommi
Rother, Kristian
Schneider, Maria Victoria
Attwood, Teresa K.
Best practices in bioinformatics training for life scientists
title Best practices in bioinformatics training for life scientists
title_full Best practices in bioinformatics training for life scientists
title_fullStr Best practices in bioinformatics training for life scientists
title_full_unstemmed Best practices in bioinformatics training for life scientists
title_short Best practices in bioinformatics training for life scientists
title_sort best practices in bioinformatics training for life scientists
topic Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3771230/
https://www.ncbi.nlm.nih.gov/pubmed/23803301
http://dx.doi.org/10.1093/bib/bbt043
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