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Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency

It has been demonstrated for some cancers that the frequency of somatic oncogenic mutations may vary in ancestral populations. To determine whether key driver alterations might occur at different frequencies in colorectal cancer, we applied a high-throughput genotyping platform (OncoMap) to query 38...

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Autores principales: Hanna, Megan C., Go, Christina, Roden, Christine, Jones, Robert T., Pochanard, Panisa, Javed, Ahmed Yasir, Javed, Awais, Mondal, Chandrani, Palescandolo, Emanuele, Van Hummelen, Paul, Hatton, Charles, Bass, Adam J., Chun, Sung Min, Na, Deuk Chae, Kim, Tae-Im, Jang, Se Jin, Osarogiagbon, Raymond U., Hahn, William C., Meyerson, Matthew, Garraway, Levi A., MacConaill, Laura E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3774610/
https://www.ncbi.nlm.nih.gov/pubmed/24066160
http://dx.doi.org/10.1371/journal.pone.0074950
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author Hanna, Megan C.
Go, Christina
Roden, Christine
Jones, Robert T.
Pochanard, Panisa
Javed, Ahmed Yasir
Javed, Awais
Mondal, Chandrani
Palescandolo, Emanuele
Van Hummelen, Paul
Hatton, Charles
Bass, Adam J.
Chun, Sung Min
Na, Deuk Chae
Kim, Tae-Im
Jang, Se Jin
Osarogiagbon, Raymond U.
Hahn, William C.
Meyerson, Matthew
Garraway, Levi A.
MacConaill, Laura E.
author_facet Hanna, Megan C.
Go, Christina
Roden, Christine
Jones, Robert T.
Pochanard, Panisa
Javed, Ahmed Yasir
Javed, Awais
Mondal, Chandrani
Palescandolo, Emanuele
Van Hummelen, Paul
Hatton, Charles
Bass, Adam J.
Chun, Sung Min
Na, Deuk Chae
Kim, Tae-Im
Jang, Se Jin
Osarogiagbon, Raymond U.
Hahn, William C.
Meyerson, Matthew
Garraway, Levi A.
MacConaill, Laura E.
author_sort Hanna, Megan C.
collection PubMed
description It has been demonstrated for some cancers that the frequency of somatic oncogenic mutations may vary in ancestral populations. To determine whether key driver alterations might occur at different frequencies in colorectal cancer, we applied a high-throughput genotyping platform (OncoMap) to query 385 mutations across 33 known cancer genes in colorectal cancer DNA from 83 Asian, 149 Black and 195 White patients. We found that Asian patients had fewer canonical oncogenic mutations in the genes tested (60% vs Black 79% (P = 0.011) and White 77% (P = 0.015)), and that BRAF mutations occurred at a higher frequency in White patients (17% vs Asian 4% (P = 0.004) and Black 7% (P = 0.014)). These results suggest that the use of genomic approaches to elucidate the different ancestral determinants harbored by patient populations may help to more precisely and effectively treat colorectal cancer.
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spelling pubmed-37746102013-09-24 Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency Hanna, Megan C. Go, Christina Roden, Christine Jones, Robert T. Pochanard, Panisa Javed, Ahmed Yasir Javed, Awais Mondal, Chandrani Palescandolo, Emanuele Van Hummelen, Paul Hatton, Charles Bass, Adam J. Chun, Sung Min Na, Deuk Chae Kim, Tae-Im Jang, Se Jin Osarogiagbon, Raymond U. Hahn, William C. Meyerson, Matthew Garraway, Levi A. MacConaill, Laura E. PLoS One Research Article It has been demonstrated for some cancers that the frequency of somatic oncogenic mutations may vary in ancestral populations. To determine whether key driver alterations might occur at different frequencies in colorectal cancer, we applied a high-throughput genotyping platform (OncoMap) to query 385 mutations across 33 known cancer genes in colorectal cancer DNA from 83 Asian, 149 Black and 195 White patients. We found that Asian patients had fewer canonical oncogenic mutations in the genes tested (60% vs Black 79% (P = 0.011) and White 77% (P = 0.015)), and that BRAF mutations occurred at a higher frequency in White patients (17% vs Asian 4% (P = 0.004) and Black 7% (P = 0.014)). These results suggest that the use of genomic approaches to elucidate the different ancestral determinants harbored by patient populations may help to more precisely and effectively treat colorectal cancer. Public Library of Science 2013-09-16 /pmc/articles/PMC3774610/ /pubmed/24066160 http://dx.doi.org/10.1371/journal.pone.0074950 Text en © 2013 Hanna et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Hanna, Megan C.
Go, Christina
Roden, Christine
Jones, Robert T.
Pochanard, Panisa
Javed, Ahmed Yasir
Javed, Awais
Mondal, Chandrani
Palescandolo, Emanuele
Van Hummelen, Paul
Hatton, Charles
Bass, Adam J.
Chun, Sung Min
Na, Deuk Chae
Kim, Tae-Im
Jang, Se Jin
Osarogiagbon, Raymond U.
Hahn, William C.
Meyerson, Matthew
Garraway, Levi A.
MacConaill, Laura E.
Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency
title Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency
title_full Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency
title_fullStr Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency
title_full_unstemmed Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency
title_short Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency
title_sort colorectal cancers from distinct ancestral populations show variations in braf mutation frequency
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3774610/
https://www.ncbi.nlm.nih.gov/pubmed/24066160
http://dx.doi.org/10.1371/journal.pone.0074950
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