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Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency
It has been demonstrated for some cancers that the frequency of somatic oncogenic mutations may vary in ancestral populations. To determine whether key driver alterations might occur at different frequencies in colorectal cancer, we applied a high-throughput genotyping platform (OncoMap) to query 38...
Autores principales: | , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3774610/ https://www.ncbi.nlm.nih.gov/pubmed/24066160 http://dx.doi.org/10.1371/journal.pone.0074950 |
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author | Hanna, Megan C. Go, Christina Roden, Christine Jones, Robert T. Pochanard, Panisa Javed, Ahmed Yasir Javed, Awais Mondal, Chandrani Palescandolo, Emanuele Van Hummelen, Paul Hatton, Charles Bass, Adam J. Chun, Sung Min Na, Deuk Chae Kim, Tae-Im Jang, Se Jin Osarogiagbon, Raymond U. Hahn, William C. Meyerson, Matthew Garraway, Levi A. MacConaill, Laura E. |
author_facet | Hanna, Megan C. Go, Christina Roden, Christine Jones, Robert T. Pochanard, Panisa Javed, Ahmed Yasir Javed, Awais Mondal, Chandrani Palescandolo, Emanuele Van Hummelen, Paul Hatton, Charles Bass, Adam J. Chun, Sung Min Na, Deuk Chae Kim, Tae-Im Jang, Se Jin Osarogiagbon, Raymond U. Hahn, William C. Meyerson, Matthew Garraway, Levi A. MacConaill, Laura E. |
author_sort | Hanna, Megan C. |
collection | PubMed |
description | It has been demonstrated for some cancers that the frequency of somatic oncogenic mutations may vary in ancestral populations. To determine whether key driver alterations might occur at different frequencies in colorectal cancer, we applied a high-throughput genotyping platform (OncoMap) to query 385 mutations across 33 known cancer genes in colorectal cancer DNA from 83 Asian, 149 Black and 195 White patients. We found that Asian patients had fewer canonical oncogenic mutations in the genes tested (60% vs Black 79% (P = 0.011) and White 77% (P = 0.015)), and that BRAF mutations occurred at a higher frequency in White patients (17% vs Asian 4% (P = 0.004) and Black 7% (P = 0.014)). These results suggest that the use of genomic approaches to elucidate the different ancestral determinants harbored by patient populations may help to more precisely and effectively treat colorectal cancer. |
format | Online Article Text |
id | pubmed-3774610 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-37746102013-09-24 Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency Hanna, Megan C. Go, Christina Roden, Christine Jones, Robert T. Pochanard, Panisa Javed, Ahmed Yasir Javed, Awais Mondal, Chandrani Palescandolo, Emanuele Van Hummelen, Paul Hatton, Charles Bass, Adam J. Chun, Sung Min Na, Deuk Chae Kim, Tae-Im Jang, Se Jin Osarogiagbon, Raymond U. Hahn, William C. Meyerson, Matthew Garraway, Levi A. MacConaill, Laura E. PLoS One Research Article It has been demonstrated for some cancers that the frequency of somatic oncogenic mutations may vary in ancestral populations. To determine whether key driver alterations might occur at different frequencies in colorectal cancer, we applied a high-throughput genotyping platform (OncoMap) to query 385 mutations across 33 known cancer genes in colorectal cancer DNA from 83 Asian, 149 Black and 195 White patients. We found that Asian patients had fewer canonical oncogenic mutations in the genes tested (60% vs Black 79% (P = 0.011) and White 77% (P = 0.015)), and that BRAF mutations occurred at a higher frequency in White patients (17% vs Asian 4% (P = 0.004) and Black 7% (P = 0.014)). These results suggest that the use of genomic approaches to elucidate the different ancestral determinants harbored by patient populations may help to more precisely and effectively treat colorectal cancer. Public Library of Science 2013-09-16 /pmc/articles/PMC3774610/ /pubmed/24066160 http://dx.doi.org/10.1371/journal.pone.0074950 Text en © 2013 Hanna et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Hanna, Megan C. Go, Christina Roden, Christine Jones, Robert T. Pochanard, Panisa Javed, Ahmed Yasir Javed, Awais Mondal, Chandrani Palescandolo, Emanuele Van Hummelen, Paul Hatton, Charles Bass, Adam J. Chun, Sung Min Na, Deuk Chae Kim, Tae-Im Jang, Se Jin Osarogiagbon, Raymond U. Hahn, William C. Meyerson, Matthew Garraway, Levi A. MacConaill, Laura E. Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency |
title | Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency |
title_full | Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency |
title_fullStr | Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency |
title_full_unstemmed | Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency |
title_short | Colorectal Cancers from Distinct Ancestral Populations Show Variations in BRAF Mutation Frequency |
title_sort | colorectal cancers from distinct ancestral populations show variations in braf mutation frequency |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3774610/ https://www.ncbi.nlm.nih.gov/pubmed/24066160 http://dx.doi.org/10.1371/journal.pone.0074950 |
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