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“Zebrafishing” for Novel Genes Relevant to the Glomerular Filtration Barrier

Data for genes relevant to glomerular filtration barrier function or proteinuria is continually increasing in an era of microarrays, genome-wide association studies, and quantitative trait locus analysis. Researchers are limited by published literature searches to select the most relevant genes to i...

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Autores principales: Hanke, Nils, Staggs, Lynne, Schroder, Patricia, Litteral, Jennifer, Fleig, Susanne, Kaufeld, Jessica, Pauli, Cornelius, Haller, Hermann, Schiffer, Mario
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3784067/
https://www.ncbi.nlm.nih.gov/pubmed/24106712
http://dx.doi.org/10.1155/2013/658270
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author Hanke, Nils
Staggs, Lynne
Schroder, Patricia
Litteral, Jennifer
Fleig, Susanne
Kaufeld, Jessica
Pauli, Cornelius
Haller, Hermann
Schiffer, Mario
author_facet Hanke, Nils
Staggs, Lynne
Schroder, Patricia
Litteral, Jennifer
Fleig, Susanne
Kaufeld, Jessica
Pauli, Cornelius
Haller, Hermann
Schiffer, Mario
author_sort Hanke, Nils
collection PubMed
description Data for genes relevant to glomerular filtration barrier function or proteinuria is continually increasing in an era of microarrays, genome-wide association studies, and quantitative trait locus analysis. Researchers are limited by published literature searches to select the most relevant genes to investigate. High-throughput cell cultures and other in vitro systems ultimately need to demonstrate proof in an in vivo model. Generating mammalian models for the genes of interest is costly and time intensive, and yields only a small number of test subjects. These models also have many pitfalls such as possible embryonic mortality and failure to generate phenotypes or generate nonkidney specific phenotypes. Here we describe an in vivo zebrafish model as a simple vertebrate screening system to identify genes relevant to glomerular filtration barrier function. Using our technology, we are able to screen entirely novel genes in 4–6 weeks in hundreds of live test subjects at a fraction of the cost of a mammalian model. Our system produces consistent and reliable evidence for gene relevance in glomerular kidney disease; the results then provide merit for further analysis in mammalian models.
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spelling pubmed-37840672013-10-08 “Zebrafishing” for Novel Genes Relevant to the Glomerular Filtration Barrier Hanke, Nils Staggs, Lynne Schroder, Patricia Litteral, Jennifer Fleig, Susanne Kaufeld, Jessica Pauli, Cornelius Haller, Hermann Schiffer, Mario Biomed Res Int Review Article Data for genes relevant to glomerular filtration barrier function or proteinuria is continually increasing in an era of microarrays, genome-wide association studies, and quantitative trait locus analysis. Researchers are limited by published literature searches to select the most relevant genes to investigate. High-throughput cell cultures and other in vitro systems ultimately need to demonstrate proof in an in vivo model. Generating mammalian models for the genes of interest is costly and time intensive, and yields only a small number of test subjects. These models also have many pitfalls such as possible embryonic mortality and failure to generate phenotypes or generate nonkidney specific phenotypes. Here we describe an in vivo zebrafish model as a simple vertebrate screening system to identify genes relevant to glomerular filtration barrier function. Using our technology, we are able to screen entirely novel genes in 4–6 weeks in hundreds of live test subjects at a fraction of the cost of a mammalian model. Our system produces consistent and reliable evidence for gene relevance in glomerular kidney disease; the results then provide merit for further analysis in mammalian models. Hindawi Publishing Corporation 2013 2013-09-11 /pmc/articles/PMC3784067/ /pubmed/24106712 http://dx.doi.org/10.1155/2013/658270 Text en Copyright © 2013 Nils Hanke et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review Article
Hanke, Nils
Staggs, Lynne
Schroder, Patricia
Litteral, Jennifer
Fleig, Susanne
Kaufeld, Jessica
Pauli, Cornelius
Haller, Hermann
Schiffer, Mario
“Zebrafishing” for Novel Genes Relevant to the Glomerular Filtration Barrier
title “Zebrafishing” for Novel Genes Relevant to the Glomerular Filtration Barrier
title_full “Zebrafishing” for Novel Genes Relevant to the Glomerular Filtration Barrier
title_fullStr “Zebrafishing” for Novel Genes Relevant to the Glomerular Filtration Barrier
title_full_unstemmed “Zebrafishing” for Novel Genes Relevant to the Glomerular Filtration Barrier
title_short “Zebrafishing” for Novel Genes Relevant to the Glomerular Filtration Barrier
title_sort “zebrafishing” for novel genes relevant to the glomerular filtration barrier
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3784067/
https://www.ncbi.nlm.nih.gov/pubmed/24106712
http://dx.doi.org/10.1155/2013/658270
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