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Explaining Bacterial Dispersion on Leaf Surfaces with an Individual-Based Model (PHYLLOSIM)

We developed the individual-based model PHYLLOSIM to explain observed variation in the size of bacterial clusters on plant leaf surfaces (the phyllosphere). Specifically, we tested how different ‘waterscapes’ impacted the diffusion of nutrients from the leaf interior to the surface and the growth of...

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Autores principales: van der Wal, Annemieke, Tecon, Robin, Kreft, Jan-Ulrich, Mooij, Wolf M., Leveau, Johan H. J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3790818/
https://www.ncbi.nlm.nih.gov/pubmed/24124501
http://dx.doi.org/10.1371/journal.pone.0075633
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author van der Wal, Annemieke
Tecon, Robin
Kreft, Jan-Ulrich
Mooij, Wolf M.
Leveau, Johan H. J.
author_facet van der Wal, Annemieke
Tecon, Robin
Kreft, Jan-Ulrich
Mooij, Wolf M.
Leveau, Johan H. J.
author_sort van der Wal, Annemieke
collection PubMed
description We developed the individual-based model PHYLLOSIM to explain observed variation in the size of bacterial clusters on plant leaf surfaces (the phyllosphere). Specifically, we tested how different ‘waterscapes’ impacted the diffusion of nutrients from the leaf interior to the surface and the growth of individual bacteria on these nutrients. In the ‘null’ model or more complex ‘patchy’ models, the surface was covered with a continuous water film or with water drops of equal or different volumes, respectively. While these models predicted the growth of individual bacterial immigrants into clusters of variable sizes, they were unable to reproduce experimentally derived, previously published patterns of dispersion which were characterized by a much larger variation in cluster sizes and a disproportionate occurrence of clusters consisting of only one or two bacteria. The fit of model predictions to experimental data was about equally poor (<5%) regardless of whether the water films were continuous or patchy. Only by allowing individual bacteria to detach from developing clusters and re-attach elsewhere to start a new cluster, did PHYLLOSIM come much closer to reproducing experimental observations. The goodness of fit including detachment increased to about 70–80% for all waterscapes. Predictions of this ‘detachment’ model were further supported by the visualization and quantification of bacterial detachment and attachment events at an agarose-water interface. Thus, both model and experiment suggest that detachment of bacterial cells from clusters is an important mechanism underlying bacterial exploration of the phyllosphere.
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spelling pubmed-37908182013-10-11 Explaining Bacterial Dispersion on Leaf Surfaces with an Individual-Based Model (PHYLLOSIM) van der Wal, Annemieke Tecon, Robin Kreft, Jan-Ulrich Mooij, Wolf M. Leveau, Johan H. J. PLoS One Research Article We developed the individual-based model PHYLLOSIM to explain observed variation in the size of bacterial clusters on plant leaf surfaces (the phyllosphere). Specifically, we tested how different ‘waterscapes’ impacted the diffusion of nutrients from the leaf interior to the surface and the growth of individual bacteria on these nutrients. In the ‘null’ model or more complex ‘patchy’ models, the surface was covered with a continuous water film or with water drops of equal or different volumes, respectively. While these models predicted the growth of individual bacterial immigrants into clusters of variable sizes, they were unable to reproduce experimentally derived, previously published patterns of dispersion which were characterized by a much larger variation in cluster sizes and a disproportionate occurrence of clusters consisting of only one or two bacteria. The fit of model predictions to experimental data was about equally poor (<5%) regardless of whether the water films were continuous or patchy. Only by allowing individual bacteria to detach from developing clusters and re-attach elsewhere to start a new cluster, did PHYLLOSIM come much closer to reproducing experimental observations. The goodness of fit including detachment increased to about 70–80% for all waterscapes. Predictions of this ‘detachment’ model were further supported by the visualization and quantification of bacterial detachment and attachment events at an agarose-water interface. Thus, both model and experiment suggest that detachment of bacterial cells from clusters is an important mechanism underlying bacterial exploration of the phyllosphere. Public Library of Science 2013-10-04 /pmc/articles/PMC3790818/ /pubmed/24124501 http://dx.doi.org/10.1371/journal.pone.0075633 Text en © 2013 van der Wal et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
van der Wal, Annemieke
Tecon, Robin
Kreft, Jan-Ulrich
Mooij, Wolf M.
Leveau, Johan H. J.
Explaining Bacterial Dispersion on Leaf Surfaces with an Individual-Based Model (PHYLLOSIM)
title Explaining Bacterial Dispersion on Leaf Surfaces with an Individual-Based Model (PHYLLOSIM)
title_full Explaining Bacterial Dispersion on Leaf Surfaces with an Individual-Based Model (PHYLLOSIM)
title_fullStr Explaining Bacterial Dispersion on Leaf Surfaces with an Individual-Based Model (PHYLLOSIM)
title_full_unstemmed Explaining Bacterial Dispersion on Leaf Surfaces with an Individual-Based Model (PHYLLOSIM)
title_short Explaining Bacterial Dispersion on Leaf Surfaces with an Individual-Based Model (PHYLLOSIM)
title_sort explaining bacterial dispersion on leaf surfaces with an individual-based model (phyllosim)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3790818/
https://www.ncbi.nlm.nih.gov/pubmed/24124501
http://dx.doi.org/10.1371/journal.pone.0075633
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