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Elucidation of Substrate Specificity in Aspergillus nidulans UDP-Galactose-4-Epimerase

The frequency of invasive fungal infections has rapidly increased in recent years. Current clinical treatments are experiencing decreased potency due to severe host toxicity and the emergence of fungal drug resistance. As such, new targets and their corresponding synthetic pathways need to be explor...

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Autores principales: Dalrymple, Sean A., Ko, John, Sheoran, Inder, Kaminskyj, Susan G. W., Sanders, David A. R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792076/
https://www.ncbi.nlm.nih.gov/pubmed/24116166
http://dx.doi.org/10.1371/journal.pone.0076803
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author Dalrymple, Sean A.
Ko, John
Sheoran, Inder
Kaminskyj, Susan G. W.
Sanders, David A. R.
author_facet Dalrymple, Sean A.
Ko, John
Sheoran, Inder
Kaminskyj, Susan G. W.
Sanders, David A. R.
author_sort Dalrymple, Sean A.
collection PubMed
description The frequency of invasive fungal infections has rapidly increased in recent years. Current clinical treatments are experiencing decreased potency due to severe host toxicity and the emergence of fungal drug resistance. As such, new targets and their corresponding synthetic pathways need to be explored for drug development purposes. In this context, galactofuranose residues, which are employed in fungal cell wall construction, but are notably absent in animals, represent an appealing target. Herein we present the structural and biochemical characterization of UDP-galactose-4-epimerase from Aspergillus nidulans which produces the precursor UDP-galactopyranose required for galactofuranose synthesis. Examination of the structural model revealed both NAD(+) and UDP-glucopyranose were bound within the active site cleft in a near identical fashion to that found in the Human epimerase. Mutational studies on the conserved catalytic motif support a similar mechanism to that established for the Human counterpart is likely operational within the A. nidulans epimerase. While the K (m) and k (cat) for the enzyme were determined to be 0.11 mM and 12.8 s(-1), respectively, a single point mutation, namely L320C, activated the enzyme towards larger N-acetylated substrates. Docking studies designed to probe active site affinity corroborate the experimentally determined activity profiles and support the kinetic inhibition results.
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spelling pubmed-37920762013-10-10 Elucidation of Substrate Specificity in Aspergillus nidulans UDP-Galactose-4-Epimerase Dalrymple, Sean A. Ko, John Sheoran, Inder Kaminskyj, Susan G. W. Sanders, David A. R. PLoS One Research Article The frequency of invasive fungal infections has rapidly increased in recent years. Current clinical treatments are experiencing decreased potency due to severe host toxicity and the emergence of fungal drug resistance. As such, new targets and their corresponding synthetic pathways need to be explored for drug development purposes. In this context, galactofuranose residues, which are employed in fungal cell wall construction, but are notably absent in animals, represent an appealing target. Herein we present the structural and biochemical characterization of UDP-galactose-4-epimerase from Aspergillus nidulans which produces the precursor UDP-galactopyranose required for galactofuranose synthesis. Examination of the structural model revealed both NAD(+) and UDP-glucopyranose were bound within the active site cleft in a near identical fashion to that found in the Human epimerase. Mutational studies on the conserved catalytic motif support a similar mechanism to that established for the Human counterpart is likely operational within the A. nidulans epimerase. While the K (m) and k (cat) for the enzyme were determined to be 0.11 mM and 12.8 s(-1), respectively, a single point mutation, namely L320C, activated the enzyme towards larger N-acetylated substrates. Docking studies designed to probe active site affinity corroborate the experimentally determined activity profiles and support the kinetic inhibition results. Public Library of Science 2013-10-07 /pmc/articles/PMC3792076/ /pubmed/24116166 http://dx.doi.org/10.1371/journal.pone.0076803 Text en © 2013 Dalrymple et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Dalrymple, Sean A.
Ko, John
Sheoran, Inder
Kaminskyj, Susan G. W.
Sanders, David A. R.
Elucidation of Substrate Specificity in Aspergillus nidulans UDP-Galactose-4-Epimerase
title Elucidation of Substrate Specificity in Aspergillus nidulans UDP-Galactose-4-Epimerase
title_full Elucidation of Substrate Specificity in Aspergillus nidulans UDP-Galactose-4-Epimerase
title_fullStr Elucidation of Substrate Specificity in Aspergillus nidulans UDP-Galactose-4-Epimerase
title_full_unstemmed Elucidation of Substrate Specificity in Aspergillus nidulans UDP-Galactose-4-Epimerase
title_short Elucidation of Substrate Specificity in Aspergillus nidulans UDP-Galactose-4-Epimerase
title_sort elucidation of substrate specificity in aspergillus nidulans udp-galactose-4-epimerase
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792076/
https://www.ncbi.nlm.nih.gov/pubmed/24116166
http://dx.doi.org/10.1371/journal.pone.0076803
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