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Alternative mRNA Splicing Generates Two Distinct ADAM12 Prodomain Variants

Human ADAM12, transcript variant 1 (later on referred to as Var-1b), present in publicly available databases contains the sequence 5′-GTAATTCTG-3′ at the nucleotide positions 340–348 of the coding region, at the 3′ end of exon 4. The translation product of this variant, ADAM12-Lb, includes the three...

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Autores principales: Duhachek-Muggy, Sara, Li, Hui, Qi, Yue, Zolkiewska, Anna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792144/
https://www.ncbi.nlm.nih.gov/pubmed/24116070
http://dx.doi.org/10.1371/journal.pone.0075730
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author Duhachek-Muggy, Sara
Li, Hui
Qi, Yue
Zolkiewska, Anna
author_facet Duhachek-Muggy, Sara
Li, Hui
Qi, Yue
Zolkiewska, Anna
author_sort Duhachek-Muggy, Sara
collection PubMed
description Human ADAM12, transcript variant 1 (later on referred to as Var-1b), present in publicly available databases contains the sequence 5′-GTAATTCTG-3′ at the nucleotide positions 340–348 of the coding region, at the 3′ end of exon 4. The translation product of this variant, ADAM12-Lb, includes the three amino acid motif (114)VIL(116) in the prodomain. This motif is not conserved in ADAM12 from different species and is not present in other human ADAMs. Currently, it is not clear whether a shorter variant, Var-1a, encoding the protein version without the (114)VIL(116) motif, ADAM12-La, is expressed in human. In this work, we have established that human mammary epithelial cells and breast cancer cells express both Var-1a and Var-1b transcripts. Importantly, the proteolytic processing and intracellular trafficking of the corresponding ADAM12-La and ADAM12-Lb proteins are different. While ADAM12-La is cleaved and trafficked to the cell surface in a manner similar to ADAM12 in other species, ADAM12-Lb is retained in the ER and is not proteolytically processed. Furthermore, the relative abundance of ADAM12-La and ADAM12-Lb proteins detected in several breast cancer cell lines varies significantly. We conclude that the canonical form of transmembrane ADAM12 is represented by Var-1a/ADAM12-La, rather than Var-1b/ADAM12-Lb currently featured in major sequence databases.
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spelling pubmed-37921442013-10-10 Alternative mRNA Splicing Generates Two Distinct ADAM12 Prodomain Variants Duhachek-Muggy, Sara Li, Hui Qi, Yue Zolkiewska, Anna PLoS One Research Article Human ADAM12, transcript variant 1 (later on referred to as Var-1b), present in publicly available databases contains the sequence 5′-GTAATTCTG-3′ at the nucleotide positions 340–348 of the coding region, at the 3′ end of exon 4. The translation product of this variant, ADAM12-Lb, includes the three amino acid motif (114)VIL(116) in the prodomain. This motif is not conserved in ADAM12 from different species and is not present in other human ADAMs. Currently, it is not clear whether a shorter variant, Var-1a, encoding the protein version without the (114)VIL(116) motif, ADAM12-La, is expressed in human. In this work, we have established that human mammary epithelial cells and breast cancer cells express both Var-1a and Var-1b transcripts. Importantly, the proteolytic processing and intracellular trafficking of the corresponding ADAM12-La and ADAM12-Lb proteins are different. While ADAM12-La is cleaved and trafficked to the cell surface in a manner similar to ADAM12 in other species, ADAM12-Lb is retained in the ER and is not proteolytically processed. Furthermore, the relative abundance of ADAM12-La and ADAM12-Lb proteins detected in several breast cancer cell lines varies significantly. We conclude that the canonical form of transmembrane ADAM12 is represented by Var-1a/ADAM12-La, rather than Var-1b/ADAM12-Lb currently featured in major sequence databases. Public Library of Science 2013-10-07 /pmc/articles/PMC3792144/ /pubmed/24116070 http://dx.doi.org/10.1371/journal.pone.0075730 Text en © 2013 Duhachek-Muggy et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Duhachek-Muggy, Sara
Li, Hui
Qi, Yue
Zolkiewska, Anna
Alternative mRNA Splicing Generates Two Distinct ADAM12 Prodomain Variants
title Alternative mRNA Splicing Generates Two Distinct ADAM12 Prodomain Variants
title_full Alternative mRNA Splicing Generates Two Distinct ADAM12 Prodomain Variants
title_fullStr Alternative mRNA Splicing Generates Two Distinct ADAM12 Prodomain Variants
title_full_unstemmed Alternative mRNA Splicing Generates Two Distinct ADAM12 Prodomain Variants
title_short Alternative mRNA Splicing Generates Two Distinct ADAM12 Prodomain Variants
title_sort alternative mrna splicing generates two distinct adam12 prodomain variants
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792144/
https://www.ncbi.nlm.nih.gov/pubmed/24116070
http://dx.doi.org/10.1371/journal.pone.0075730
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