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Barriers to transmission of transcriptional noise in a c-fos c-jun pathway
We explored how transcriptional noise propagates in gene-regulatory pathways by studying the induction of two downstream genes by transcription factors c-fos and c-jun. They are produced for a brief period following serum stimulation of cells and then activate the promoters of their target genes by...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
European Molecular Biology Organization
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792345/ https://www.ncbi.nlm.nih.gov/pubmed/24022005 http://dx.doi.org/10.1038/msb.2013.45 |
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author | Shah, Khyati Tyagi, Sanjay |
author_facet | Shah, Khyati Tyagi, Sanjay |
author_sort | Shah, Khyati |
collection | PubMed |
description | We explored how transcriptional noise propagates in gene-regulatory pathways by studying the induction of two downstream genes by transcription factors c-fos and c-jun. They are produced for a brief period following serum stimulation of cells and then activate the promoters of their target genes by binding to them as heterodimers. We found that, even though they are coordinately expressed at the population level, in individual cells the expression of c-fos and c-jun is noisy and uncorrelated with each other. The expression of the downstream genes is also noisy, but there is little or no effect of the noise in the upstream genes on the expression of the downstream genes. The noise is not transmitted, because the number of heterodimers present in single cells is relatively invariant, and the induction of downstream genes is insensitive to the number of heterodimers in individual cells. Sequestration of promoters of the downstream genes within compact chromatin is a likely cause of this insensitivity. These barriers to the propagation and amplification of noise are likely to be commonplace in higher eukaryotes. |
format | Online Article Text |
id | pubmed-3792345 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | European Molecular Biology Organization |
record_format | MEDLINE/PubMed |
spelling | pubmed-37923452013-10-18 Barriers to transmission of transcriptional noise in a c-fos c-jun pathway Shah, Khyati Tyagi, Sanjay Mol Syst Biol Article We explored how transcriptional noise propagates in gene-regulatory pathways by studying the induction of two downstream genes by transcription factors c-fos and c-jun. They are produced for a brief period following serum stimulation of cells and then activate the promoters of their target genes by binding to them as heterodimers. We found that, even though they are coordinately expressed at the population level, in individual cells the expression of c-fos and c-jun is noisy and uncorrelated with each other. The expression of the downstream genes is also noisy, but there is little or no effect of the noise in the upstream genes on the expression of the downstream genes. The noise is not transmitted, because the number of heterodimers present in single cells is relatively invariant, and the induction of downstream genes is insensitive to the number of heterodimers in individual cells. Sequestration of promoters of the downstream genes within compact chromatin is a likely cause of this insensitivity. These barriers to the propagation and amplification of noise are likely to be commonplace in higher eukaryotes. European Molecular Biology Organization 2013-09-10 /pmc/articles/PMC3792345/ /pubmed/24022005 http://dx.doi.org/10.1038/msb.2013.45 Text en Copyright © 2013, EMBO and Macmillan Publishers Limited https://creativecommons.org/licenses/by-nc-nd/3.0/This is an open-access article distributed under the terms of the Creative Commons Attribution Noncommercial No Derivative Works 3.0 Unported License, which permits distribution and reproduction in any medium, provided the original author and source are credited. This license does not permit commercial exploitation or the creation of derivative works without specific permission. |
spellingShingle | Article Shah, Khyati Tyagi, Sanjay Barriers to transmission of transcriptional noise in a c-fos c-jun pathway |
title | Barriers to transmission of transcriptional noise in a c-fos c-jun pathway |
title_full | Barriers to transmission of transcriptional noise in a c-fos c-jun pathway |
title_fullStr | Barriers to transmission of transcriptional noise in a c-fos c-jun pathway |
title_full_unstemmed | Barriers to transmission of transcriptional noise in a c-fos c-jun pathway |
title_short | Barriers to transmission of transcriptional noise in a c-fos c-jun pathway |
title_sort | barriers to transmission of transcriptional noise in a c-fos c-jun pathway |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792345/ https://www.ncbi.nlm.nih.gov/pubmed/24022005 http://dx.doi.org/10.1038/msb.2013.45 |
work_keys_str_mv | AT shahkhyati barrierstotransmissionoftranscriptionalnoiseinacfoscjunpathway AT tyagisanjay barrierstotransmissionoftranscriptionalnoiseinacfoscjunpathway |