Cargando…

Barriers to transmission of transcriptional noise in a c-fos c-jun pathway

We explored how transcriptional noise propagates in gene-regulatory pathways by studying the induction of two downstream genes by transcription factors c-fos and c-jun. They are produced for a brief period following serum stimulation of cells and then activate the promoters of their target genes by...

Descripción completa

Detalles Bibliográficos
Autores principales: Shah, Khyati, Tyagi, Sanjay
Formato: Online Artículo Texto
Lenguaje:English
Publicado: European Molecular Biology Organization 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792345/
https://www.ncbi.nlm.nih.gov/pubmed/24022005
http://dx.doi.org/10.1038/msb.2013.45
_version_ 1782286837188919296
author Shah, Khyati
Tyagi, Sanjay
author_facet Shah, Khyati
Tyagi, Sanjay
author_sort Shah, Khyati
collection PubMed
description We explored how transcriptional noise propagates in gene-regulatory pathways by studying the induction of two downstream genes by transcription factors c-fos and c-jun. They are produced for a brief period following serum stimulation of cells and then activate the promoters of their target genes by binding to them as heterodimers. We found that, even though they are coordinately expressed at the population level, in individual cells the expression of c-fos and c-jun is noisy and uncorrelated with each other. The expression of the downstream genes is also noisy, but there is little or no effect of the noise in the upstream genes on the expression of the downstream genes. The noise is not transmitted, because the number of heterodimers present in single cells is relatively invariant, and the induction of downstream genes is insensitive to the number of heterodimers in individual cells. Sequestration of promoters of the downstream genes within compact chromatin is a likely cause of this insensitivity. These barriers to the propagation and amplification of noise are likely to be commonplace in higher eukaryotes.
format Online
Article
Text
id pubmed-3792345
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher European Molecular Biology Organization
record_format MEDLINE/PubMed
spelling pubmed-37923452013-10-18 Barriers to transmission of transcriptional noise in a c-fos c-jun pathway Shah, Khyati Tyagi, Sanjay Mol Syst Biol Article We explored how transcriptional noise propagates in gene-regulatory pathways by studying the induction of two downstream genes by transcription factors c-fos and c-jun. They are produced for a brief period following serum stimulation of cells and then activate the promoters of their target genes by binding to them as heterodimers. We found that, even though they are coordinately expressed at the population level, in individual cells the expression of c-fos and c-jun is noisy and uncorrelated with each other. The expression of the downstream genes is also noisy, but there is little or no effect of the noise in the upstream genes on the expression of the downstream genes. The noise is not transmitted, because the number of heterodimers present in single cells is relatively invariant, and the induction of downstream genes is insensitive to the number of heterodimers in individual cells. Sequestration of promoters of the downstream genes within compact chromatin is a likely cause of this insensitivity. These barriers to the propagation and amplification of noise are likely to be commonplace in higher eukaryotes. European Molecular Biology Organization 2013-09-10 /pmc/articles/PMC3792345/ /pubmed/24022005 http://dx.doi.org/10.1038/msb.2013.45 Text en Copyright © 2013, EMBO and Macmillan Publishers Limited https://creativecommons.org/licenses/by-nc-nd/3.0/This is an open-access article distributed under the terms of the Creative Commons Attribution Noncommercial No Derivative Works 3.0 Unported License, which permits distribution and reproduction in any medium, provided the original author and source are credited. This license does not permit commercial exploitation or the creation of derivative works without specific permission.
spellingShingle Article
Shah, Khyati
Tyagi, Sanjay
Barriers to transmission of transcriptional noise in a c-fos c-jun pathway
title Barriers to transmission of transcriptional noise in a c-fos c-jun pathway
title_full Barriers to transmission of transcriptional noise in a c-fos c-jun pathway
title_fullStr Barriers to transmission of transcriptional noise in a c-fos c-jun pathway
title_full_unstemmed Barriers to transmission of transcriptional noise in a c-fos c-jun pathway
title_short Barriers to transmission of transcriptional noise in a c-fos c-jun pathway
title_sort barriers to transmission of transcriptional noise in a c-fos c-jun pathway
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792345/
https://www.ncbi.nlm.nih.gov/pubmed/24022005
http://dx.doi.org/10.1038/msb.2013.45
work_keys_str_mv AT shahkhyati barrierstotransmissionoftranscriptionalnoiseinacfoscjunpathway
AT tyagisanjay barrierstotransmissionoftranscriptionalnoiseinacfoscjunpathway