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Sub-millisecond time-resolved SAXS using a continuous-flow mixer and X-ray microbeam

Small-angle X-ray scattering (SAXS) is a well established technique to probe the nanoscale structure and interactions in soft matter. It allows one to study the structure of native particles in near physiological environments and to analyze structural changes in response to variations in external co...

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Autores principales: Graceffa, Rita, Nobrega, R. Paul, Barrea, Raul A., Kathuria, Sagar V., Chakravarthy, Srinivas, Bilsel, Osman, Irving, Thomas C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3795536/
https://www.ncbi.nlm.nih.gov/pubmed/24121320
http://dx.doi.org/10.1107/S0909049513021833
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author Graceffa, Rita
Nobrega, R. Paul
Barrea, Raul A.
Kathuria, Sagar V.
Chakravarthy, Srinivas
Bilsel, Osman
Irving, Thomas C.
author_facet Graceffa, Rita
Nobrega, R. Paul
Barrea, Raul A.
Kathuria, Sagar V.
Chakravarthy, Srinivas
Bilsel, Osman
Irving, Thomas C.
author_sort Graceffa, Rita
collection PubMed
description Small-angle X-ray scattering (SAXS) is a well established technique to probe the nanoscale structure and interactions in soft matter. It allows one to study the structure of native particles in near physiological environments and to analyze structural changes in response to variations in external conditions. The combination of microfluidics and SAXS provides a powerful tool to investigate dynamic processes on a molecular level with sub-millisecond time resolution. Reaction kinetics in the sub-millisecond time range has been achieved using continuous-flow mixers manufactured using micromachining techniques. The time resolution of these devices has previously been limited, in part, by the X-ray beam sizes delivered by typical SAXS beamlines. These limitations can be overcome using optics to focus X-rays to the micrometer size range providing that beam divergence and photon flux suitable for performing SAXS experiments can be maintained. Such micro-SAXS in combination with microfluidic devices would be an attractive probe for time-resolved studies. Here, the development of a high-duty-cycle scanning microsecond-time-resolution SAXS capability, built around the Kirkpatrick–Baez mirror-based microbeam system at the Biophysics Collaborative Access Team (BioCAT) beamline 18ID at the Advanced Photon Source, Argonne National Laboratory, is reported. A detailed description of the microbeam small-angle-scattering instrument, the turbulent flow mixer, as well as the data acquisition and control and analysis software is provided. Results are presented where this apparatus was used to study the folding of cytochrome c. Future prospects for this technique are discussed.
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spelling pubmed-37955362013-10-15 Sub-millisecond time-resolved SAXS using a continuous-flow mixer and X-ray microbeam Graceffa, Rita Nobrega, R. Paul Barrea, Raul A. Kathuria, Sagar V. Chakravarthy, Srinivas Bilsel, Osman Irving, Thomas C. J Synchrotron Radiat Diffraction Structural Biology Small-angle X-ray scattering (SAXS) is a well established technique to probe the nanoscale structure and interactions in soft matter. It allows one to study the structure of native particles in near physiological environments and to analyze structural changes in response to variations in external conditions. The combination of microfluidics and SAXS provides a powerful tool to investigate dynamic processes on a molecular level with sub-millisecond time resolution. Reaction kinetics in the sub-millisecond time range has been achieved using continuous-flow mixers manufactured using micromachining techniques. The time resolution of these devices has previously been limited, in part, by the X-ray beam sizes delivered by typical SAXS beamlines. These limitations can be overcome using optics to focus X-rays to the micrometer size range providing that beam divergence and photon flux suitable for performing SAXS experiments can be maintained. Such micro-SAXS in combination with microfluidic devices would be an attractive probe for time-resolved studies. Here, the development of a high-duty-cycle scanning microsecond-time-resolution SAXS capability, built around the Kirkpatrick–Baez mirror-based microbeam system at the Biophysics Collaborative Access Team (BioCAT) beamline 18ID at the Advanced Photon Source, Argonne National Laboratory, is reported. A detailed description of the microbeam small-angle-scattering instrument, the turbulent flow mixer, as well as the data acquisition and control and analysis software is provided. Results are presented where this apparatus was used to study the folding of cytochrome c. Future prospects for this technique are discussed. International Union of Crystallography 2013-11-01 2013-10-01 /pmc/articles/PMC3795536/ /pubmed/24121320 http://dx.doi.org/10.1107/S0909049513021833 Text en © Rita Graceffa et al. 2013 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Diffraction Structural Biology
Graceffa, Rita
Nobrega, R. Paul
Barrea, Raul A.
Kathuria, Sagar V.
Chakravarthy, Srinivas
Bilsel, Osman
Irving, Thomas C.
Sub-millisecond time-resolved SAXS using a continuous-flow mixer and X-ray microbeam
title Sub-millisecond time-resolved SAXS using a continuous-flow mixer and X-ray microbeam
title_full Sub-millisecond time-resolved SAXS using a continuous-flow mixer and X-ray microbeam
title_fullStr Sub-millisecond time-resolved SAXS using a continuous-flow mixer and X-ray microbeam
title_full_unstemmed Sub-millisecond time-resolved SAXS using a continuous-flow mixer and X-ray microbeam
title_short Sub-millisecond time-resolved SAXS using a continuous-flow mixer and X-ray microbeam
title_sort sub-millisecond time-resolved saxs using a continuous-flow mixer and x-ray microbeam
topic Diffraction Structural Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3795536/
https://www.ncbi.nlm.nih.gov/pubmed/24121320
http://dx.doi.org/10.1107/S0909049513021833
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