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Sparse Solution of Fiber Orientation Distribution Function by Diffusion Decomposition

Fiber orientation is the key information in diffusion tractography. Several deconvolution methods have been proposed to obtain fiber orientations by estimating a fiber orientation distribution function (ODF). However, the L (2) regularization used in deconvolution often leads to false fibers that co...

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Autores principales: Yeh, Fang-Cheng, Tseng, Wen-Yih Isaac
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3795723/
https://www.ncbi.nlm.nih.gov/pubmed/24146772
http://dx.doi.org/10.1371/journal.pone.0075747
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author Yeh, Fang-Cheng
Tseng, Wen-Yih Isaac
author_facet Yeh, Fang-Cheng
Tseng, Wen-Yih Isaac
author_sort Yeh, Fang-Cheng
collection PubMed
description Fiber orientation is the key information in diffusion tractography. Several deconvolution methods have been proposed to obtain fiber orientations by estimating a fiber orientation distribution function (ODF). However, the L (2) regularization used in deconvolution often leads to false fibers that compromise the specificity of the results. To address this problem, we propose a method called diffusion decomposition, which obtains a sparse solution of fiber ODF by decomposing the diffusion ODF obtained from q-ball imaging (QBI), diffusion spectrum imaging (DSI), or generalized q-sampling imaging (GQI). A simulation study, a phantom study, and an in-vivo study were conducted to examine the performance of diffusion decomposition. The simulation study showed that diffusion decomposition was more accurate than both constrained spherical deconvolution and ball-and-sticks model. The phantom study showed that the angular error of diffusion decomposition was significantly lower than those of constrained spherical deconvolution at 30° crossing and ball-and-sticks model at 60° crossing. The in-vivo study showed that diffusion decomposition can be applied to QBI, DSI, or GQI, and the resolved fiber orientations were consistent regardless of the diffusion sampling schemes and diffusion reconstruction methods. The performance of diffusion decomposition was further demonstrated by resolving crossing fibers on a 30-direction QBI dataset and a 40-direction DSI dataset. In conclusion, diffusion decomposition can improve angular resolution and resolve crossing fibers in datasets with low SNR and substantially reduced number of diffusion encoding directions. These advantages may be valuable for human connectome studies and clinical research.
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spelling pubmed-37957232013-10-21 Sparse Solution of Fiber Orientation Distribution Function by Diffusion Decomposition Yeh, Fang-Cheng Tseng, Wen-Yih Isaac PLoS One Research Article Fiber orientation is the key information in diffusion tractography. Several deconvolution methods have been proposed to obtain fiber orientations by estimating a fiber orientation distribution function (ODF). However, the L (2) regularization used in deconvolution often leads to false fibers that compromise the specificity of the results. To address this problem, we propose a method called diffusion decomposition, which obtains a sparse solution of fiber ODF by decomposing the diffusion ODF obtained from q-ball imaging (QBI), diffusion spectrum imaging (DSI), or generalized q-sampling imaging (GQI). A simulation study, a phantom study, and an in-vivo study were conducted to examine the performance of diffusion decomposition. The simulation study showed that diffusion decomposition was more accurate than both constrained spherical deconvolution and ball-and-sticks model. The phantom study showed that the angular error of diffusion decomposition was significantly lower than those of constrained spherical deconvolution at 30° crossing and ball-and-sticks model at 60° crossing. The in-vivo study showed that diffusion decomposition can be applied to QBI, DSI, or GQI, and the resolved fiber orientations were consistent regardless of the diffusion sampling schemes and diffusion reconstruction methods. The performance of diffusion decomposition was further demonstrated by resolving crossing fibers on a 30-direction QBI dataset and a 40-direction DSI dataset. In conclusion, diffusion decomposition can improve angular resolution and resolve crossing fibers in datasets with low SNR and substantially reduced number of diffusion encoding directions. These advantages may be valuable for human connectome studies and clinical research. Public Library of Science 2013-10-11 /pmc/articles/PMC3795723/ /pubmed/24146772 http://dx.doi.org/10.1371/journal.pone.0075747 Text en © 2013 Yeh and Tseng http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Yeh, Fang-Cheng
Tseng, Wen-Yih Isaac
Sparse Solution of Fiber Orientation Distribution Function by Diffusion Decomposition
title Sparse Solution of Fiber Orientation Distribution Function by Diffusion Decomposition
title_full Sparse Solution of Fiber Orientation Distribution Function by Diffusion Decomposition
title_fullStr Sparse Solution of Fiber Orientation Distribution Function by Diffusion Decomposition
title_full_unstemmed Sparse Solution of Fiber Orientation Distribution Function by Diffusion Decomposition
title_short Sparse Solution of Fiber Orientation Distribution Function by Diffusion Decomposition
title_sort sparse solution of fiber orientation distribution function by diffusion decomposition
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3795723/
https://www.ncbi.nlm.nih.gov/pubmed/24146772
http://dx.doi.org/10.1371/journal.pone.0075747
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