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PCG-Cut: Graph Driven Segmentation of the Prostate Central Gland

Prostate cancer is the most abundant cancer in men, with over 200,000 expected new cases and around 28,000 deaths in 2012 in the US alone. In this study, the segmentation results for the prostate central gland (PCG) in MR scans are presented. The aim of this research study is to apply a graph-based...

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Autor principal: Egger, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3795743/
https://www.ncbi.nlm.nih.gov/pubmed/24146901
http://dx.doi.org/10.1371/journal.pone.0076645
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author Egger, Jan
author_facet Egger, Jan
author_sort Egger, Jan
collection PubMed
description Prostate cancer is the most abundant cancer in men, with over 200,000 expected new cases and around 28,000 deaths in 2012 in the US alone. In this study, the segmentation results for the prostate central gland (PCG) in MR scans are presented. The aim of this research study is to apply a graph-based algorithm to automated segmentation (i.e. delineation) of organ limits for the prostate central gland. The ultimate goal is to apply automated segmentation approach to facilitate efficient MR-guided biopsy and radiation treatment planning. The automated segmentation algorithm used is graph-driven based on a spherical template. Therefore, rays are sent through the surface points of a polyhedron to sample the graph’s nodes. After graph construction – which only requires the center of the polyhedron defined by the user and located inside the prostate center gland – the minimal cost closed set on the graph is computed via a polynomial time s-t-cut, which results in the segmentation of the prostate center gland’s boundaries and volume. The algorithm has been realized as a C++ module within the medical research platform MeVisLab and the ground truth of the central gland boundaries were manually extracted by clinical experts (interventional radiologists) with several years of experience in prostate treatment. For evaluation the automated segmentations of the proposed scheme have been compared with the manual segmentations, yielding an average Dice Similarity Coefficient (DSC) of 78.94±10.85%.
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spelling pubmed-37957432013-10-21 PCG-Cut: Graph Driven Segmentation of the Prostate Central Gland Egger, Jan PLoS One Research Article Prostate cancer is the most abundant cancer in men, with over 200,000 expected new cases and around 28,000 deaths in 2012 in the US alone. In this study, the segmentation results for the prostate central gland (PCG) in MR scans are presented. The aim of this research study is to apply a graph-based algorithm to automated segmentation (i.e. delineation) of organ limits for the prostate central gland. The ultimate goal is to apply automated segmentation approach to facilitate efficient MR-guided biopsy and radiation treatment planning. The automated segmentation algorithm used is graph-driven based on a spherical template. Therefore, rays are sent through the surface points of a polyhedron to sample the graph’s nodes. After graph construction – which only requires the center of the polyhedron defined by the user and located inside the prostate center gland – the minimal cost closed set on the graph is computed via a polynomial time s-t-cut, which results in the segmentation of the prostate center gland’s boundaries and volume. The algorithm has been realized as a C++ module within the medical research platform MeVisLab and the ground truth of the central gland boundaries were manually extracted by clinical experts (interventional radiologists) with several years of experience in prostate treatment. For evaluation the automated segmentations of the proposed scheme have been compared with the manual segmentations, yielding an average Dice Similarity Coefficient (DSC) of 78.94±10.85%. Public Library of Science 2013-10-11 /pmc/articles/PMC3795743/ /pubmed/24146901 http://dx.doi.org/10.1371/journal.pone.0076645 Text en © 2013 Jan Egger http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Egger, Jan
PCG-Cut: Graph Driven Segmentation of the Prostate Central Gland
title PCG-Cut: Graph Driven Segmentation of the Prostate Central Gland
title_full PCG-Cut: Graph Driven Segmentation of the Prostate Central Gland
title_fullStr PCG-Cut: Graph Driven Segmentation of the Prostate Central Gland
title_full_unstemmed PCG-Cut: Graph Driven Segmentation of the Prostate Central Gland
title_short PCG-Cut: Graph Driven Segmentation of the Prostate Central Gland
title_sort pcg-cut: graph driven segmentation of the prostate central gland
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3795743/
https://www.ncbi.nlm.nih.gov/pubmed/24146901
http://dx.doi.org/10.1371/journal.pone.0076645
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