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Molecular Characterization of Ferulate 5-Hydroxylase Gene from Kenaf (Hibiscus cannabinus L.)

The purpose of this study is to clone and characterize the expression pattern of a F5H gene encoding ferulate 5-hydroxylase in the phenylpropanoid pathway from kenaf (Hibiscus cannabinus L.). Kenaf is a fast-growing dicotyledonous plant valued for its biomass. F5H, a cytochrome P450-dependent monoox...

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Autores principales: Kim, Jonggeun, Choi, Bosung, Park, Young-Hwan, Cho, Byoung-Kwan, Lim, Hyoun-Sub, Natarajan, Savithiry, Park, Sang-Un, Bae, Hanhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3800569/
https://www.ncbi.nlm.nih.gov/pubmed/24204204
http://dx.doi.org/10.1155/2013/421578
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author Kim, Jonggeun
Choi, Bosung
Park, Young-Hwan
Cho, Byoung-Kwan
Lim, Hyoun-Sub
Natarajan, Savithiry
Park, Sang-Un
Bae, Hanhong
author_facet Kim, Jonggeun
Choi, Bosung
Park, Young-Hwan
Cho, Byoung-Kwan
Lim, Hyoun-Sub
Natarajan, Savithiry
Park, Sang-Un
Bae, Hanhong
author_sort Kim, Jonggeun
collection PubMed
description The purpose of this study is to clone and characterize the expression pattern of a F5H gene encoding ferulate 5-hydroxylase in the phenylpropanoid pathway from kenaf (Hibiscus cannabinus L.). Kenaf is a fast-growing dicotyledonous plant valued for its biomass. F5H, a cytochrome P450-dependent monooxygenase (CYP84), is a key enzyme for syringyl lignin biosynthesis. The full length of the F5H ortholog was cloned and characterized. The full-length F5H ortholog consists of a 1,557-bp open reading frame (ORF) encoding 518 amino acids (GenBank Accession number JX524278). The deduced amino acid sequence showed that kenaf F5H had the highest similarity (78%) with that of Populus trichocarpa. Transcriptional analysis of F5H ortholog was conducted using quantitative real-time PCR during the developmental stages of various tissues and in response to various abiotic stresses. The highest transcript level of the F5H ortholog was observed in immature flower tissues and in early stage (6 week-old) of stem tissues, with a certain level of expression in all tissues tested. The highest transcript level of F5H ortholog was observed at the late time points after treatments with NaCl (48 h), wounding (24 h), cold (24 h), abscisic acid (24 h), and methyl jasmonate (24 h).
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spelling pubmed-38005692013-11-07 Molecular Characterization of Ferulate 5-Hydroxylase Gene from Kenaf (Hibiscus cannabinus L.) Kim, Jonggeun Choi, Bosung Park, Young-Hwan Cho, Byoung-Kwan Lim, Hyoun-Sub Natarajan, Savithiry Park, Sang-Un Bae, Hanhong ScientificWorldJournal Research Article The purpose of this study is to clone and characterize the expression pattern of a F5H gene encoding ferulate 5-hydroxylase in the phenylpropanoid pathway from kenaf (Hibiscus cannabinus L.). Kenaf is a fast-growing dicotyledonous plant valued for its biomass. F5H, a cytochrome P450-dependent monooxygenase (CYP84), is a key enzyme for syringyl lignin biosynthesis. The full length of the F5H ortholog was cloned and characterized. The full-length F5H ortholog consists of a 1,557-bp open reading frame (ORF) encoding 518 amino acids (GenBank Accession number JX524278). The deduced amino acid sequence showed that kenaf F5H had the highest similarity (78%) with that of Populus trichocarpa. Transcriptional analysis of F5H ortholog was conducted using quantitative real-time PCR during the developmental stages of various tissues and in response to various abiotic stresses. The highest transcript level of the F5H ortholog was observed in immature flower tissues and in early stage (6 week-old) of stem tissues, with a certain level of expression in all tissues tested. The highest transcript level of F5H ortholog was observed at the late time points after treatments with NaCl (48 h), wounding (24 h), cold (24 h), abscisic acid (24 h), and methyl jasmonate (24 h). Hindawi Publishing Corporation 2013-09-24 /pmc/articles/PMC3800569/ /pubmed/24204204 http://dx.doi.org/10.1155/2013/421578 Text en Copyright © 2013 Jonggeun Kim et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Kim, Jonggeun
Choi, Bosung
Park, Young-Hwan
Cho, Byoung-Kwan
Lim, Hyoun-Sub
Natarajan, Savithiry
Park, Sang-Un
Bae, Hanhong
Molecular Characterization of Ferulate 5-Hydroxylase Gene from Kenaf (Hibiscus cannabinus L.)
title Molecular Characterization of Ferulate 5-Hydroxylase Gene from Kenaf (Hibiscus cannabinus L.)
title_full Molecular Characterization of Ferulate 5-Hydroxylase Gene from Kenaf (Hibiscus cannabinus L.)
title_fullStr Molecular Characterization of Ferulate 5-Hydroxylase Gene from Kenaf (Hibiscus cannabinus L.)
title_full_unstemmed Molecular Characterization of Ferulate 5-Hydroxylase Gene from Kenaf (Hibiscus cannabinus L.)
title_short Molecular Characterization of Ferulate 5-Hydroxylase Gene from Kenaf (Hibiscus cannabinus L.)
title_sort molecular characterization of ferulate 5-hydroxylase gene from kenaf (hibiscus cannabinus l.)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3800569/
https://www.ncbi.nlm.nih.gov/pubmed/24204204
http://dx.doi.org/10.1155/2013/421578
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