Cargando…

Bacterial Community Composition of South China Sea Sediments through Pyrosequencing-Based Analysis of 16S rRNA Genes

BACKGROUND: Subseafloor sediments accumulate large amounts of organic and inorganic materials that contain a highly diverse microbial ecosystem. The aim of this study was to survey the bacterial community of subseafloor sediments from the South China Sea. METHODOLOGY/PRINCIPAL FINDINGS: Pyrosequenci...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhu, Daochen, Tanabe, Shoko-Hosoi, Yang, Chong, Zhang, Weimin, Sun, Jianzhong
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2013
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3804488/ https://www.ncbi.nlm.nih.gov/pubmed/24205246 http://dx.doi.org/10.1371/journal.pone.0078501

Ejemplares similares

Correction: Bacterial Community Composition of South China Sea Sediments through Pyrosequencing-Based Analysis of 16S rRNA Genes
por: Zhu, Daochen, et al.
Publicado: (2013)

Bacterial Community Composition in the Gut Content and Ambient Sediment of Sea Cucumber Apostichopus japonicus Revealed by 16S rRNA Gene Pyrosequencing
por: Gao, Fei, et al.
Publicado: (2014)

Genome Sequence of the Alkaliphilic Bacterial Strain Bacillus ligninesis L1, a Novel Degrader of Lignin
por: Zhu, Daochen, et al.
Publicado: (2013)

Taxonomic composition of the particle-attached and free-living bacterial assemblages in the Northwest Mediterranean Sea analyzed by pyrosequencing of the 16S rRNA
por: Crespo, Bibiana G, et al.
Publicado: (2013)

Bacterial community composition in the gut content of Lampetra japonica revealed by 16S rRNA gene pyrosequencing
por: Zuo, Yu, et al.
Publicado: (2017)

Sputum Microbiota in Tuberculosis as Revealed by 16S rRNA Pyrosequencing
por: Cheung, Man Kit, et al.
Publicado: (2013)

A Comparison of rpoB and 16S rRNA as Markers in Pyrosequencing Studies of Bacterial Diversity
por: Vos, Michiel, et al.
Publicado: (2012)

Bacterial Population Dynamics in a Laboratory Activated Sludge Reactor Monitored by Pyrosequencing of 16S rRNA
por: Satoh, Hiroyasu, et al.
Publicado: (2013)

16S rRNA Gene Pyrosequencing Reveals Bacterial Dysbiosis in the Duodenum of Dogs with Idiopathic Inflammatory Bowel Disease
por: Suchodolski, Jan S., et al.
Publicado: (2012)

Cataloguing the bacterial community of the Great Salt Plains, Oklahoma using 16S rRNA based metagenomics pyrosequencing
por: Gad, Ahmed H.
Publicado: (2017)

Oral Microbiome Profiles: 16S rRNA Pyrosequencing and Microarray Assay Comparison
por: Ahn, Jiyoung, et al.
Publicado: (2011)

Improved Detection of Bifidobacteria with Optimised 16S rRNA-Gene Based Pyrosequencing
por: Sim, Kathleen, et al.
Publicado: (2012)

Influence of 16S rRNA Hypervariable Region on Estimates of Bacterial Diversity and Community Composition in Seawater and Marine Sediment
por: Kerrigan, Zak, et al.
Publicado: (2019)

Benthic Bacterial Community Composition in the Oligohaline-Marine Transition of Surface Sediments in the Baltic Sea Based on rRNA Analysis
por: Klier, Julia, et al.
Publicado: (2018)

Prokaryotic Community Composition in Arctic Kongsfjorden and Sub-Arctic Northern Bering Sea Sediments As Revealed by 454 Pyrosequencing
por: Zeng, Yin-Xin, et al.
Publicado: (2017)

Impact of Fishmeal Replacement in Diets for Gilthead Sea Bream (Sparus aurata) on the Gastrointestinal Microbiota Determined by Pyrosequencing the 16S rRNA Gene
por: Estruch, G., et al.
Publicado: (2015)

Artifactual pyrosequencing reads in multiple-displacement-amplified sediment metagenomes from the Red Sea
por: Wang, Yong, et al.
Publicado: (2013)

The Influence of DNA Extraction Procedure and Primer Set on the Bacterial Community Analysis by Pyrosequencing of Barcoded 16S rRNA Gene Amplicons
por: Starke, Ingo C., et al.
Publicado: (2014)

Comparison of bacterial culture and 16S rRNA community profiling by clonal analysis and pyrosequencing for the characterization of the dentine caries-associated microbiome
por: Schulze-Schweifing, Kathrin, et al.
Publicado: (2014)

16S rRNA Amplicon Sequencing of Sediment Bacterial Communities in an Oyster Farm in Rhode Island
por: Stevens, Joshua T. E., et al.
Publicado: (2019)

Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers
por: Liu, Zongzhi, et al.
Publicado: (2008)

Characterization of the Fecal Microbial Communities of Duroc Pigs Using 16S rRNA Gene Pyrosequencing
por: Pajarillo, Edward Alain B., et al.
Publicado: (2015)

Effects of season and experimental warming on the bacterial community in a temperate mountain forest soil assessed by 16S rRNA gene pyrosequencing
por: Kuffner, Melanie, et al.
Publicado: (2012)

Assessing bacterial diversity in a seawater-processing wastewater treatment plant by 454-pyrosequencing of the 16S rRNA and amoA genes
por: Sánchez, Olga, et al.
Publicado: (2013)

Draft Genome Sequences of Four Bacterial Strains Isolated from Sediment of the South China Sea
por: Ishaq, Sidra Erum, et al.
Publicado: (2022)

Up to Species-level Community Analysis of Human Gut Microbiota by 16S rRNA Amplicon Pyrosequencing
por: NAKAYAMA, Jiro, et al.
Publicado: (2013)

16S rRNA gene pyrosequencing of reference and clinical samples and investigation of the temperature stability of microbiome profiles
por: Hang, Jun, et al.
Publicado: (2014)

Dataset of 16S rRNA and alkB genes in hydrocarbon polluted soils of Kuwait as revealed by Pyrosequencing
por: Al-Momin, Sabah, et al.
Publicado: (2022)

A Comprehensive Census of Microbial Diversity in Hot Springs of Tengchong, Yunnan Province China Using 16S rRNA Gene Pyrosequencing
por: Hou, Weiguo, et al.
Publicado: (2013)

Dimethylsulfoniopropionate Biosynthetic Bacteria in the Subseafloor Sediments of the South China Sea
por: Zhang, Yunhui, et al.
Publicado: (2021)

Microdiversity of Deep-Sea Bacillales Isolated from Tyrrhenian Sea Sediments as Revealed by ARISA, 16S rRNA Gene Sequencing and BOX-PCR Fingerprinting
por: Ettoumi, Besma, et al.
Publicado: (2013)

Deep-sea Sediment Resuspension by Internal Solitary Waves in the Northern South China Sea
por: Jia, Yonggang, et al.
Publicado: (2019)

Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.)
por: van Kessel, Maartje AHJ, et al.
Publicado: (2011)

Abundance of sulfur‐degrading bacteria in a benthic bacterial community of shallow sea sediment in the off‐Terengganu coast of the South China Sea
por: Marziah, Zahar, et al.
Publicado: (2016)

Protist diversity and community assembly in surface sediments of the South China Sea
por: Wu, Wenxue, et al.
Publicado: (2019)

Deep 16S rRNA Pyrosequencing Reveals a Bacterial Community Associated with Banana Fusarium Wilt Disease Suppression Induced by Bio-Organic Fertilizer Application
por: Shen, Zongzhuan, et al.
Publicado: (2014)

Profiling the Succession of Bacterial Communities throughout the Life Stages of a Higher Termite Nasutitermes arborum (Termitidae, Nasutitermitinae) Using 16S rRNA Gene Pyrosequencing
por: Diouf, Michel, et al.
Publicado: (2015)

Pyrosequencing 16S rRNA genes of bacteria associated with wild tiger mosquito Aedes albopictus: a pilot study
por: Minard, Guillaume, et al.
Publicado: (2014)

Microbial Diversity in Hummock and Hollow Soils of Three Wetlands on the Qinghai-Tibetan Plateau Revealed by 16S rRNA Pyrosequencing
por: Deng, Yongcui, et al.
Publicado: (2014)

Species-level core oral bacteriome identified by 16S rRNA pyrosequencing in a healthy young Arab population
por: Al-hebshi, Nezar Noor, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_4206lspegdbhmecvuan433d34e