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Evidence for a Retroviral Insertion in TRPM1 as the Cause of Congenital Stationary Night Blindness and Leopard Complex Spotting in the Horse
Leopard complex spotting is a group of white spotting patterns in horses caused by an incompletely dominant gene (LP) where homozygotes (LP/LP) are also affected with congenital stationary night blindness. Previous studies implicated Transient Receptor Potential Cation Channel, Subfamily M, Member 1...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3805535/ https://www.ncbi.nlm.nih.gov/pubmed/24167615 http://dx.doi.org/10.1371/journal.pone.0078280 |
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author | Bellone, Rebecca R. Holl, Heather Setaluri, Vijayasaradhi Devi, Sulochana Maddodi, Nityanand Archer, Sheila Sandmeyer, Lynne Ludwig, Arne Foerster, Daniel Pruvost, Melanie Reissmann, Monika Bortfeldt, Ralf Adelson, David L. Lim, Sim Lin Nelson, Janelle Haase, Bianca Engensteiner, Martina Leeb, Tosso Forsyth, George Mienaltowski, Michael J. Mahadevan, Padmanabhan Hofreiter, Michael Paijmans, Johanna L. A. Gonzalez-Fortes, Gloria Grahn, Bruce Brooks, Samantha A. |
author_facet | Bellone, Rebecca R. Holl, Heather Setaluri, Vijayasaradhi Devi, Sulochana Maddodi, Nityanand Archer, Sheila Sandmeyer, Lynne Ludwig, Arne Foerster, Daniel Pruvost, Melanie Reissmann, Monika Bortfeldt, Ralf Adelson, David L. Lim, Sim Lin Nelson, Janelle Haase, Bianca Engensteiner, Martina Leeb, Tosso Forsyth, George Mienaltowski, Michael J. Mahadevan, Padmanabhan Hofreiter, Michael Paijmans, Johanna L. A. Gonzalez-Fortes, Gloria Grahn, Bruce Brooks, Samantha A. |
author_sort | Bellone, Rebecca R. |
collection | PubMed |
description | Leopard complex spotting is a group of white spotting patterns in horses caused by an incompletely dominant gene (LP) where homozygotes (LP/LP) are also affected with congenital stationary night blindness. Previous studies implicated Transient Receptor Potential Cation Channel, Subfamily M, Member 1 (TRPM1) as the best candidate gene for both CSNB and LP. RNA-Seq data pinpointed a 1378 bp insertion in intron 1 of TRPM1 as the potential cause. This insertion, a long terminal repeat (LTR) of an endogenous retrovirus, was completely associated with LP, testing 511 horses (χ(2)=1022.00, p<<0.0005), and CSNB, testing 43 horses (χ(2)=43, p<<0.0005). The LTR was shown to disrupt TRPM1 transcription by premature poly-adenylation. Furthermore, while deleterious transposable element insertions should be quickly selected against the identification of this insertion in three ancient DNA samples suggests it has been maintained in the horse gene pool for at least 17,000 years. This study represents the first description of an LTR insertion being associated with both a pigmentation phenotype and an eye disorder. |
format | Online Article Text |
id | pubmed-3805535 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38055352013-10-28 Evidence for a Retroviral Insertion in TRPM1 as the Cause of Congenital Stationary Night Blindness and Leopard Complex Spotting in the Horse Bellone, Rebecca R. Holl, Heather Setaluri, Vijayasaradhi Devi, Sulochana Maddodi, Nityanand Archer, Sheila Sandmeyer, Lynne Ludwig, Arne Foerster, Daniel Pruvost, Melanie Reissmann, Monika Bortfeldt, Ralf Adelson, David L. Lim, Sim Lin Nelson, Janelle Haase, Bianca Engensteiner, Martina Leeb, Tosso Forsyth, George Mienaltowski, Michael J. Mahadevan, Padmanabhan Hofreiter, Michael Paijmans, Johanna L. A. Gonzalez-Fortes, Gloria Grahn, Bruce Brooks, Samantha A. PLoS One Research Article Leopard complex spotting is a group of white spotting patterns in horses caused by an incompletely dominant gene (LP) where homozygotes (LP/LP) are also affected with congenital stationary night blindness. Previous studies implicated Transient Receptor Potential Cation Channel, Subfamily M, Member 1 (TRPM1) as the best candidate gene for both CSNB and LP. RNA-Seq data pinpointed a 1378 bp insertion in intron 1 of TRPM1 as the potential cause. This insertion, a long terminal repeat (LTR) of an endogenous retrovirus, was completely associated with LP, testing 511 horses (χ(2)=1022.00, p<<0.0005), and CSNB, testing 43 horses (χ(2)=43, p<<0.0005). The LTR was shown to disrupt TRPM1 transcription by premature poly-adenylation. Furthermore, while deleterious transposable element insertions should be quickly selected against the identification of this insertion in three ancient DNA samples suggests it has been maintained in the horse gene pool for at least 17,000 years. This study represents the first description of an LTR insertion being associated with both a pigmentation phenotype and an eye disorder. Public Library of Science 2013-10-22 /pmc/articles/PMC3805535/ /pubmed/24167615 http://dx.doi.org/10.1371/journal.pone.0078280 Text en © 2013 Bellone et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Bellone, Rebecca R. Holl, Heather Setaluri, Vijayasaradhi Devi, Sulochana Maddodi, Nityanand Archer, Sheila Sandmeyer, Lynne Ludwig, Arne Foerster, Daniel Pruvost, Melanie Reissmann, Monika Bortfeldt, Ralf Adelson, David L. Lim, Sim Lin Nelson, Janelle Haase, Bianca Engensteiner, Martina Leeb, Tosso Forsyth, George Mienaltowski, Michael J. Mahadevan, Padmanabhan Hofreiter, Michael Paijmans, Johanna L. A. Gonzalez-Fortes, Gloria Grahn, Bruce Brooks, Samantha A. Evidence for a Retroviral Insertion in TRPM1 as the Cause of Congenital Stationary Night Blindness and Leopard Complex Spotting in the Horse |
title | Evidence for a Retroviral Insertion in TRPM1 as the Cause of Congenital Stationary Night Blindness and Leopard Complex Spotting in the Horse |
title_full | Evidence for a Retroviral Insertion in TRPM1 as the Cause of Congenital Stationary Night Blindness and Leopard Complex Spotting in the Horse |
title_fullStr | Evidence for a Retroviral Insertion in TRPM1 as the Cause of Congenital Stationary Night Blindness and Leopard Complex Spotting in the Horse |
title_full_unstemmed | Evidence for a Retroviral Insertion in TRPM1 as the Cause of Congenital Stationary Night Blindness and Leopard Complex Spotting in the Horse |
title_short | Evidence for a Retroviral Insertion in TRPM1 as the Cause of Congenital Stationary Night Blindness and Leopard Complex Spotting in the Horse |
title_sort | evidence for a retroviral insertion in trpm1 as the cause of congenital stationary night blindness and leopard complex spotting in the horse |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3805535/ https://www.ncbi.nlm.nih.gov/pubmed/24167615 http://dx.doi.org/10.1371/journal.pone.0078280 |
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