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Physical principles for scalable neural recording

Simultaneously measuring the activities of all neurons in a mammalian brain at millisecond resolution is a challenge beyond the limits of existing techniques in neuroscience. Entirely new approaches may be required, motivating an analysis of the fundamental physical constraints on the problem. We ou...

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Autores principales: Marblestone, Adam H., Zamft, Bradley M., Maguire, Yael G., Shapiro, Mikhail G., Cybulski, Thaddeus R., Glaser, Joshua I., Amodei, Dario, Stranges, P. Benjamin, Kalhor, Reza, Dalrymple, David A., Seo, Dongjin, Alon, Elad, Maharbiz, Michel M., Carmena, Jose M., Rabaey, Jan M., Boyden, Edward S., Church, George M., Kording, Konrad P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3807567/
https://www.ncbi.nlm.nih.gov/pubmed/24187539
http://dx.doi.org/10.3389/fncom.2013.00137
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author Marblestone, Adam H.
Zamft, Bradley M.
Maguire, Yael G.
Shapiro, Mikhail G.
Cybulski, Thaddeus R.
Glaser, Joshua I.
Amodei, Dario
Stranges, P. Benjamin
Kalhor, Reza
Dalrymple, David A.
Seo, Dongjin
Alon, Elad
Maharbiz, Michel M.
Carmena, Jose M.
Rabaey, Jan M.
Boyden, Edward S.
Church, George M.
Kording, Konrad P.
author_facet Marblestone, Adam H.
Zamft, Bradley M.
Maguire, Yael G.
Shapiro, Mikhail G.
Cybulski, Thaddeus R.
Glaser, Joshua I.
Amodei, Dario
Stranges, P. Benjamin
Kalhor, Reza
Dalrymple, David A.
Seo, Dongjin
Alon, Elad
Maharbiz, Michel M.
Carmena, Jose M.
Rabaey, Jan M.
Boyden, Edward S.
Church, George M.
Kording, Konrad P.
author_sort Marblestone, Adam H.
collection PubMed
description Simultaneously measuring the activities of all neurons in a mammalian brain at millisecond resolution is a challenge beyond the limits of existing techniques in neuroscience. Entirely new approaches may be required, motivating an analysis of the fundamental physical constraints on the problem. We outline the physical principles governing brain activity mapping using optical, electrical, magnetic resonance, and molecular modalities of neural recording. Focusing on the mouse brain, we analyze the scalability of each method, concentrating on the limitations imposed by spatiotemporal resolution, energy dissipation, and volume displacement. Based on this analysis, all existing approaches require orders of magnitude improvement in key parameters. Electrical recording is limited by the low multiplexing capacity of electrodes and their lack of intrinsic spatial resolution, optical methods are constrained by the scattering of visible light in brain tissue, magnetic resonance is hindered by the diffusion and relaxation timescales of water protons, and the implementation of molecular recording is complicated by the stochastic kinetics of enzymes. Understanding the physical limits of brain activity mapping may provide insight into opportunities for novel solutions. For example, unconventional methods for delivering electrodes may enable unprecedented numbers of recording sites, embedded optical devices could allow optical detectors to be placed within a few scattering lengths of the measured neurons, and new classes of molecularly engineered sensors might obviate cumbersome hardware architectures. We also study the physics of powering and communicating with microscale devices embedded in brain tissue and find that, while radio-frequency electromagnetic data transmission suffers from a severe power–bandwidth tradeoff, communication via infrared light or ultrasound may allow high data rates due to the possibility of spatial multiplexing. The use of embedded local recording and wireless data transmission would only be viable, however, given major improvements to the power efficiency of microelectronic devices.
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spelling pubmed-38075672013-11-01 Physical principles for scalable neural recording Marblestone, Adam H. Zamft, Bradley M. Maguire, Yael G. Shapiro, Mikhail G. Cybulski, Thaddeus R. Glaser, Joshua I. Amodei, Dario Stranges, P. Benjamin Kalhor, Reza Dalrymple, David A. Seo, Dongjin Alon, Elad Maharbiz, Michel M. Carmena, Jose M. Rabaey, Jan M. Boyden, Edward S. Church, George M. Kording, Konrad P. Front Comput Neurosci Neuroscience Simultaneously measuring the activities of all neurons in a mammalian brain at millisecond resolution is a challenge beyond the limits of existing techniques in neuroscience. Entirely new approaches may be required, motivating an analysis of the fundamental physical constraints on the problem. We outline the physical principles governing brain activity mapping using optical, electrical, magnetic resonance, and molecular modalities of neural recording. Focusing on the mouse brain, we analyze the scalability of each method, concentrating on the limitations imposed by spatiotemporal resolution, energy dissipation, and volume displacement. Based on this analysis, all existing approaches require orders of magnitude improvement in key parameters. Electrical recording is limited by the low multiplexing capacity of electrodes and their lack of intrinsic spatial resolution, optical methods are constrained by the scattering of visible light in brain tissue, magnetic resonance is hindered by the diffusion and relaxation timescales of water protons, and the implementation of molecular recording is complicated by the stochastic kinetics of enzymes. Understanding the physical limits of brain activity mapping may provide insight into opportunities for novel solutions. For example, unconventional methods for delivering electrodes may enable unprecedented numbers of recording sites, embedded optical devices could allow optical detectors to be placed within a few scattering lengths of the measured neurons, and new classes of molecularly engineered sensors might obviate cumbersome hardware architectures. We also study the physics of powering and communicating with microscale devices embedded in brain tissue and find that, while radio-frequency electromagnetic data transmission suffers from a severe power–bandwidth tradeoff, communication via infrared light or ultrasound may allow high data rates due to the possibility of spatial multiplexing. The use of embedded local recording and wireless data transmission would only be viable, however, given major improvements to the power efficiency of microelectronic devices. Frontiers Media S.A. 2013-10-21 /pmc/articles/PMC3807567/ /pubmed/24187539 http://dx.doi.org/10.3389/fncom.2013.00137 Text en Copyright © 2013 Marblestone, Zamft, Maguire, Shapiro, Cybulski, Glaser, Amodei, Stranges, Kalhor, Dalrymple, Seo, Alon, Maharbiz, Carmena, Rabaey, Boyden, Church and Kording. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Marblestone, Adam H.
Zamft, Bradley M.
Maguire, Yael G.
Shapiro, Mikhail G.
Cybulski, Thaddeus R.
Glaser, Joshua I.
Amodei, Dario
Stranges, P. Benjamin
Kalhor, Reza
Dalrymple, David A.
Seo, Dongjin
Alon, Elad
Maharbiz, Michel M.
Carmena, Jose M.
Rabaey, Jan M.
Boyden, Edward S.
Church, George M.
Kording, Konrad P.
Physical principles for scalable neural recording
title Physical principles for scalable neural recording
title_full Physical principles for scalable neural recording
title_fullStr Physical principles for scalable neural recording
title_full_unstemmed Physical principles for scalable neural recording
title_short Physical principles for scalable neural recording
title_sort physical principles for scalable neural recording
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3807567/
https://www.ncbi.nlm.nih.gov/pubmed/24187539
http://dx.doi.org/10.3389/fncom.2013.00137
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