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A Method for Detecting Positive Growth Autocorrelation without Marking Individuals

In most ecological studies, within-group variation is a nuisance that obscures patterns of interest and reduces statistical power. However, patterns of within-group variability often contain information about ecological processes. In particular, such patterns can be used to detect positive growth au...

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Detalles Bibliográficos
Autores principales: Brooks, Mollie E., McCoy, Michael W., Bolker, Benjamin M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3810375/
https://www.ncbi.nlm.nih.gov/pubmed/24204620
http://dx.doi.org/10.1371/journal.pone.0076389
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author Brooks, Mollie E.
McCoy, Michael W.
Bolker, Benjamin M.
author_facet Brooks, Mollie E.
McCoy, Michael W.
Bolker, Benjamin M.
author_sort Brooks, Mollie E.
collection PubMed
description In most ecological studies, within-group variation is a nuisance that obscures patterns of interest and reduces statistical power. However, patterns of within-group variability often contain information about ecological processes. In particular, such patterns can be used to detect positive growth autocorrelation (consistent variation in growth rates among individuals in a cohort across time), even in samples of unmarked individuals. Previous methods for detecting autocorrelated growth required data from marked individuals. We propose a method that requires only estimates of within-cohort variance through time, using maximum likelihood methods to obtain point estimates and confidence intervals of the correlation parameter. We test our method on simulated data sets and determine the loss in statistical power due to the inability to identify individuals. We show how to accommodate nonlinear growth trajectories and test the effects of size-dependent mortality on our method's accuracy. The method can detect significant growth autocorrelation at moderate levels of autocorrelation with moderate-sized cohorts (for example, statistical power of 80% to detect growth autocorrelation ρ (2) = 0.5 in a cohort of 100 individuals measured on 16 occasions). We present a case study of growth in the red-eyed tree frog. Better quantification of the processes driving size variation will help ecologists improve predictions of population dynamics. This work will help researchers to detect growth autocorrelation in cases where marking is logistically infeasible or causes unacceptable decreases in the fitness of marked individuals.
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spelling pubmed-38103752013-11-07 A Method for Detecting Positive Growth Autocorrelation without Marking Individuals Brooks, Mollie E. McCoy, Michael W. Bolker, Benjamin M. PLoS One Research Article In most ecological studies, within-group variation is a nuisance that obscures patterns of interest and reduces statistical power. However, patterns of within-group variability often contain information about ecological processes. In particular, such patterns can be used to detect positive growth autocorrelation (consistent variation in growth rates among individuals in a cohort across time), even in samples of unmarked individuals. Previous methods for detecting autocorrelated growth required data from marked individuals. We propose a method that requires only estimates of within-cohort variance through time, using maximum likelihood methods to obtain point estimates and confidence intervals of the correlation parameter. We test our method on simulated data sets and determine the loss in statistical power due to the inability to identify individuals. We show how to accommodate nonlinear growth trajectories and test the effects of size-dependent mortality on our method's accuracy. The method can detect significant growth autocorrelation at moderate levels of autocorrelation with moderate-sized cohorts (for example, statistical power of 80% to detect growth autocorrelation ρ (2) = 0.5 in a cohort of 100 individuals measured on 16 occasions). We present a case study of growth in the red-eyed tree frog. Better quantification of the processes driving size variation will help ecologists improve predictions of population dynamics. This work will help researchers to detect growth autocorrelation in cases where marking is logistically infeasible or causes unacceptable decreases in the fitness of marked individuals. Public Library of Science 2013-10-28 /pmc/articles/PMC3810375/ /pubmed/24204620 http://dx.doi.org/10.1371/journal.pone.0076389 Text en © 2013 Brooks et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Brooks, Mollie E.
McCoy, Michael W.
Bolker, Benjamin M.
A Method for Detecting Positive Growth Autocorrelation without Marking Individuals
title A Method for Detecting Positive Growth Autocorrelation without Marking Individuals
title_full A Method for Detecting Positive Growth Autocorrelation without Marking Individuals
title_fullStr A Method for Detecting Positive Growth Autocorrelation without Marking Individuals
title_full_unstemmed A Method for Detecting Positive Growth Autocorrelation without Marking Individuals
title_short A Method for Detecting Positive Growth Autocorrelation without Marking Individuals
title_sort method for detecting positive growth autocorrelation without marking individuals
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3810375/
https://www.ncbi.nlm.nih.gov/pubmed/24204620
http://dx.doi.org/10.1371/journal.pone.0076389
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