Cargando…

Development and Characterization of Genomic and Expressed SSRs in Citrus by Genome-Wide Analysis

Microsatellites or simple sequence repeats (SSRs) are one of the most popular sources of genetic markers and play a significant role in plant genetics and breeding. In this study, we identified citrus SSRs in the genome of Clementine mandarin and analyzed their frequency and distribution in differen...

Descripción completa

Detalles Bibliográficos
Autores principales:	Liu, Sheng-Rui, Li, Wen-Yang, Long, Dang, Hu, Chun-Gen, Zhang, Jin-Zhi
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2013
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3810390/ https://www.ncbi.nlm.nih.gov/pubmed/24204572 http://dx.doi.org/10.1371/journal.pone.0075149

Ejemplares similares

Genome-Wide Identification and Characterization of SQUAMOSA—Promoter-Binding Protein (SBP) Genes Involved in the Flowering Development of Citrus Clementina
por: Zeng, Ren-Fang, et al.
Publicado: (2019)

Genome-wide distribution comparative and composition analysis of the SSRs in Poaceae
por: Wang, Yi, et al.
Publicado: (2015)

Genome-Wide Classification and Evolutionary and Expression Analyses of Citrus MYB Transcription Factor Families in Sweet Orange
por: Hou, Xiao-Jin, et al.
Publicado: (2014)

Development and Characterization of 15 Novel Genomic SSRs for Viburnum farreri
por: Hamm, Trinity P., et al.
Publicado: (2021)

Characterization of Simple Sequence Repeats (SSRs) in Ciliated Protists Inferred by Comparative Genomics
por: Li, Yuan, et al.
Publicado: (2020)

Genome-Wide Identification and Expression Profiling of the WOX Gene Family in Citrus sinensis and Functional Analysis of a CsWUS Member
por: Shafique Khan, Faiza, et al.
Publicado: (2021)

Genome-wide identification, isolation and expression analysis of auxin response factor (ARF) gene family in sweet orange (Citrus sinensis)
por: Li, Si-Bei, et al.
Publicado: (2015)

Identification and development of novel salt-responsive candidate gene based SSRs (cg-SSRs) and MIR gene based SSRs (mir-SSRs) in bread wheat (Triticum aestivum)
por: Mehta, Geetika, et al.
Publicado: (2021)

Transferability of the EST-SSRs developed on Nules clementine (Citrus clementina Hort ex Tan) to other Citrus species and their effectiveness for genetic mapping
por: Luro, François L, et al.
Publicado: (2008)

Identifying the genome-wide genetic variation between precocious trifoliate orange and its wild type and developing new markers for genetics research
por: Zhang, Jin-Zhi, et al.
Publicado: (2016)

Genome-Wide Identification and Characterization of UTR-Introns of Citrus sinensis
por: Shi, Xiaobao, et al.
Publicado: (2020)

Genome-wide screening and characterization of long non-coding RNAs involved in flowering development of trifoliate orange (Poncirus trifoliata L. Raf.)
por: Wang, Chen-Yang, et al.
Publicado: (2017)

Coevolution between simple sequence repeats (SSRs) and virus genome size
por: Zhao, Xiangyan, et al.
Publicado: (2012)

Molecular evolution and SSRs analysis based on the chloroplast genome of Callitropsis funebris
por: Ping, Jingyao, et al.
Publicado: (2021)

Phylogenetic inference of Ericales based on plastid genomes and implication of cp-SSRs
por: Hazra, Anjan, et al.
Publicado: (2021)

Transcriptome-wide analysis of differentially expressed chemokine receptors, SNPs, and SSRs in the age-related macular degeneration
por: Saddala, Madhu Sudhana, et al.
Publicado: (2019)

Genome-wide identification, characterization, interaction network and expression profile of GRAS gene family in sweet orange (Citrus sinensis)
por: Zhang, Hua, et al.
Publicado: (2019)

Genome-Wide Identification and Characterization of the AlkB Gene Family in Sweet Orange (Citrus sinensis)
por: Huang, Aijun, et al.
Publicado: (2022)

Survey and analysis of simple sequence repeats (SSRs) present in the genomes of plant viroids
por: Qin, Lü, et al.
Publicado: (2014)

Genome-Wide Identification and Characterization of the Biosynthesis of the Polyamine Gene Family in Citrus unshiu
por: Sadiq, Saleha, et al.
Publicado: (2023)

Development and Characterization of Polymorphic Microsatellite Markers (SSRs) for an Endemic Plant, Pseudolarix amabilis (Nelson) Rehd. (Pinaceae)
por: Geng, Qi-Fang, et al.
Publicado: (2015)

Genome-wide characterization, evolution and expression profiling of UDP-glycosyltransferase family in pomelo (Citrus grandis) fruit
por: Wu, Boping, et al.
Publicado: (2020)

Genome-Wide Characterization and Expression Analysis of the SBP-Box Gene Family in Sweet Orange (Citrus sinensis)
por: Song, Na, et al.
Publicado: (2021)

Characterization of the complete chloroplast genome of Citrus reticulate (Rutaceae, Citrus)
por: Wu, Ruikai, et al.
Publicado: (2020)

Characterization of the complete chloroplast genome of Yuanjiang wild Ichang papeda (Citrus cavaleriei) in China
por: Zhang, Zi-hao, et al.
Publicado: (2020)

Development and Characterization of Novel EST-SSRs from Larix gmelinii and Their Cross-Species Transferability
por: Zhang, Guojun, et al.
Publicado: (2015)

Repertoire of SSRs in the Castor Bean Genome and Their Utilization in Genetic Diversity Analysis in Jatropha curcas
por: Sharma, Arti, et al.
Publicado: (2011)

Characterization of the complete chloroplast genome of ‘Yunning No.1’ lemon (Citrus limon)
por: Wang, Shao-hua, et al.
Publicado: (2021)

Comparative analyses of simple sequence repeats (SSRs) in 23 mosquito species genomes: Identification, characterization and distribution (Diptera: Culicidae)
por: Wang, Xiao‐Ting, et al.
Publicado: (2018)

Using genomic data to develop chloroplast DNA SSRs for the Neotropical liana Stizophyllum riparium (Bignonieae, Bignoniaceae)(1)
por: Beyer, Maila, et al.
Publicado: (2017)

Genome survey of Chinese fir (Cunninghamia lanceolata): Identification of genomic SSRs and demonstration of their utility in genetic diversity analysis
por: Lin, Erpei, et al.
Publicado: (2020)

Development and Characterization of 18 Novel EST-SSRs from the Western Flower Thrips, Frankliniella occidentalis (Pergande)
por: Yang, Xian-Ming, et al.
Publicado: (2012)

Genome Wide Characterization of Short Tandem Repeat Markers in Sweet Orange (Citrus sinensis)
por: Biswas, Manosh Kumar, et al.
Publicado: (2014)

A genome-wide 20 K citrus microarray for gene expression analysis
por: Martinez-Godoy, M Angeles, et al.
Publicado: (2008)

Genome-Wide Identification and Expression Profile Analysis of Citrus Sucrose Synthase Genes: Investigation of Possible Roles in the Regulation of Sugar Accumulation
por: Islam, Mohammad Zahidul, et al.
Publicado: (2014)

Discovery of EST-SSRs in Lung Cancer: Tagged ESTs with SSRs Lead to Differential Amino Acid and Protein Expression Patterns in Cancerous Tissues
por: Bakhtiarizadeh, Mohammad Reza, et al.
Publicado: (2011)

Comparative Genomics and Association Mapping Approaches for Blast Resistant Genes in Finger Millet Using SSRs
por: Babu, B. Kalyana, et al.
Publicado: (2014)

Draft genome of multiple resistance donor plant Sinapis alba: An insight into SSRs, annotations and phylogenetics
por: Kumari, Preetesh, et al.
Publicado: (2020)

Genome-wide identification, characterization, interaction network and expression profile of GAPDH gene family in sweet orange (Citrus sinensis)
por: Miao, Luke, et al.
Publicado: (2019)

Citrus Genomics
por: Talon, Manuel, et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_d452uka7dvkvr6irr066ng53mi