Cargando…
High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane
Solving high-resolution structures for membrane proteins continues to be a daunting challenge in the structural biology community. In this study we report our high-resolution NMR results for a transmembrane protein, outer envelope protein of molar mass 16 kDa (OEP16), an amino acid transporter from...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3812221/ https://www.ncbi.nlm.nih.gov/pubmed/24205117 http://dx.doi.org/10.1371/journal.pone.0078116 |
_version_ | 1782288954776616960 |
---|---|
author | Zook, James D. Molugu, Trivikram R. Jacobsen, Neil E. Lin, Guangxin Soll, Jürgen Cherry, Brian R. Brown, Michael F. Fromme, Petra |
author_facet | Zook, James D. Molugu, Trivikram R. Jacobsen, Neil E. Lin, Guangxin Soll, Jürgen Cherry, Brian R. Brown, Michael F. Fromme, Petra |
author_sort | Zook, James D. |
collection | PubMed |
description | Solving high-resolution structures for membrane proteins continues to be a daunting challenge in the structural biology community. In this study we report our high-resolution NMR results for a transmembrane protein, outer envelope protein of molar mass 16 kDa (OEP16), an amino acid transporter from the outer membrane of chloroplasts. Three-dimensional, high-resolution NMR experiments on the (13)C, (15)N, (2)H-triply-labeled protein were used to assign protein backbone resonances and to obtain secondary structure information. The results yield over 95% assignment of N, H(N), CO, C(α), and C(β) chemical shifts, which is essential for obtaining a high resolution structure from NMR data. Chemical shift analysis from the assignment data reveals experimental evidence for the first time on the location of the secondary structure elements on a per residue basis. In addition T (1Z) and T(2) relaxation experiments were performed in order to better understand the protein dynamics. Arginine titration experiments yield an insight into the amino acid residues responsible for protein transporter function. The results provide the necessary basis for high-resolution structural determination of this important plant membrane protein. |
format | Online Article Text |
id | pubmed-3812221 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38122212013-11-07 High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane Zook, James D. Molugu, Trivikram R. Jacobsen, Neil E. Lin, Guangxin Soll, Jürgen Cherry, Brian R. Brown, Michael F. Fromme, Petra PLoS One Research Article Solving high-resolution structures for membrane proteins continues to be a daunting challenge in the structural biology community. In this study we report our high-resolution NMR results for a transmembrane protein, outer envelope protein of molar mass 16 kDa (OEP16), an amino acid transporter from the outer membrane of chloroplasts. Three-dimensional, high-resolution NMR experiments on the (13)C, (15)N, (2)H-triply-labeled protein were used to assign protein backbone resonances and to obtain secondary structure information. The results yield over 95% assignment of N, H(N), CO, C(α), and C(β) chemical shifts, which is essential for obtaining a high resolution structure from NMR data. Chemical shift analysis from the assignment data reveals experimental evidence for the first time on the location of the secondary structure elements on a per residue basis. In addition T (1Z) and T(2) relaxation experiments were performed in order to better understand the protein dynamics. Arginine titration experiments yield an insight into the amino acid residues responsible for protein transporter function. The results provide the necessary basis for high-resolution structural determination of this important plant membrane protein. Public Library of Science 2013-10-29 /pmc/articles/PMC3812221/ /pubmed/24205117 http://dx.doi.org/10.1371/journal.pone.0078116 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. |
spellingShingle | Research Article Zook, James D. Molugu, Trivikram R. Jacobsen, Neil E. Lin, Guangxin Soll, Jürgen Cherry, Brian R. Brown, Michael F. Fromme, Petra High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane |
title | High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane |
title_full | High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane |
title_fullStr | High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane |
title_full_unstemmed | High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane |
title_short | High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane |
title_sort | high-resolution nmr reveals secondary structure and folding of amino acid transporter from outer chloroplast membrane |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3812221/ https://www.ncbi.nlm.nih.gov/pubmed/24205117 http://dx.doi.org/10.1371/journal.pone.0078116 |
work_keys_str_mv | AT zookjamesd highresolutionnmrrevealssecondarystructureandfoldingofaminoacidtransporterfromouterchloroplastmembrane AT molugutrivikramr highresolutionnmrrevealssecondarystructureandfoldingofaminoacidtransporterfromouterchloroplastmembrane AT jacobsenneile highresolutionnmrrevealssecondarystructureandfoldingofaminoacidtransporterfromouterchloroplastmembrane AT linguangxin highresolutionnmrrevealssecondarystructureandfoldingofaminoacidtransporterfromouterchloroplastmembrane AT solljurgen highresolutionnmrrevealssecondarystructureandfoldingofaminoacidtransporterfromouterchloroplastmembrane AT cherrybrianr highresolutionnmrrevealssecondarystructureandfoldingofaminoacidtransporterfromouterchloroplastmembrane AT brownmichaelf highresolutionnmrrevealssecondarystructureandfoldingofaminoacidtransporterfromouterchloroplastmembrane AT frommepetra highresolutionnmrrevealssecondarystructureandfoldingofaminoacidtransporterfromouterchloroplastmembrane |