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High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane

Solving high-resolution structures for membrane proteins continues to be a daunting challenge in the structural biology community. In this study we report our high-resolution NMR results for a transmembrane protein, outer envelope protein of molar mass 16 kDa (OEP16), an amino acid transporter from...

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Autores principales: Zook, James D., Molugu, Trivikram R., Jacobsen, Neil E., Lin, Guangxin, Soll, Jürgen, Cherry, Brian R., Brown, Michael F., Fromme, Petra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3812221/
https://www.ncbi.nlm.nih.gov/pubmed/24205117
http://dx.doi.org/10.1371/journal.pone.0078116
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author Zook, James D.
Molugu, Trivikram R.
Jacobsen, Neil E.
Lin, Guangxin
Soll, Jürgen
Cherry, Brian R.
Brown, Michael F.
Fromme, Petra
author_facet Zook, James D.
Molugu, Trivikram R.
Jacobsen, Neil E.
Lin, Guangxin
Soll, Jürgen
Cherry, Brian R.
Brown, Michael F.
Fromme, Petra
author_sort Zook, James D.
collection PubMed
description Solving high-resolution structures for membrane proteins continues to be a daunting challenge in the structural biology community. In this study we report our high-resolution NMR results for a transmembrane protein, outer envelope protein of molar mass 16 kDa (OEP16), an amino acid transporter from the outer membrane of chloroplasts. Three-dimensional, high-resolution NMR experiments on the (13)C, (15)N, (2)H-triply-labeled protein were used to assign protein backbone resonances and to obtain secondary structure information. The results yield over 95% assignment of N, H(N), CO, C(α), and C(β) chemical shifts, which is essential for obtaining a high resolution structure from NMR data. Chemical shift analysis from the assignment data reveals experimental evidence for the first time on the location of the secondary structure elements on a per residue basis. In addition T (1Z) and T(2) relaxation experiments were performed in order to better understand the protein dynamics. Arginine titration experiments yield an insight into the amino acid residues responsible for protein transporter function. The results provide the necessary basis for high-resolution structural determination of this important plant membrane protein.
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spelling pubmed-38122212013-11-07 High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane Zook, James D. Molugu, Trivikram R. Jacobsen, Neil E. Lin, Guangxin Soll, Jürgen Cherry, Brian R. Brown, Michael F. Fromme, Petra PLoS One Research Article Solving high-resolution structures for membrane proteins continues to be a daunting challenge in the structural biology community. In this study we report our high-resolution NMR results for a transmembrane protein, outer envelope protein of molar mass 16 kDa (OEP16), an amino acid transporter from the outer membrane of chloroplasts. Three-dimensional, high-resolution NMR experiments on the (13)C, (15)N, (2)H-triply-labeled protein were used to assign protein backbone resonances and to obtain secondary structure information. The results yield over 95% assignment of N, H(N), CO, C(α), and C(β) chemical shifts, which is essential for obtaining a high resolution structure from NMR data. Chemical shift analysis from the assignment data reveals experimental evidence for the first time on the location of the secondary structure elements on a per residue basis. In addition T (1Z) and T(2) relaxation experiments were performed in order to better understand the protein dynamics. Arginine titration experiments yield an insight into the amino acid residues responsible for protein transporter function. The results provide the necessary basis for high-resolution structural determination of this important plant membrane protein. Public Library of Science 2013-10-29 /pmc/articles/PMC3812221/ /pubmed/24205117 http://dx.doi.org/10.1371/journal.pone.0078116 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
spellingShingle Research Article
Zook, James D.
Molugu, Trivikram R.
Jacobsen, Neil E.
Lin, Guangxin
Soll, Jürgen
Cherry, Brian R.
Brown, Michael F.
Fromme, Petra
High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane
title High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane
title_full High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane
title_fullStr High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane
title_full_unstemmed High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane
title_short High-Resolution NMR Reveals Secondary Structure and Folding of Amino Acid Transporter from Outer Chloroplast Membrane
title_sort high-resolution nmr reveals secondary structure and folding of amino acid transporter from outer chloroplast membrane
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3812221/
https://www.ncbi.nlm.nih.gov/pubmed/24205117
http://dx.doi.org/10.1371/journal.pone.0078116
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