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Detecting functional connectivity change points for single-subject fMRI data

Recently in functional magnetic resonance imaging (fMRI) studies there has been an increased interest in understanding the dynamic manner in which brain regions communicate with one another, as subjects perform a set of experimental tasks or as their psychological state changes. Dynamic Connectivity...

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Detalles Bibliográficos
Autores principales: Cribben, Ivor, Wager, Tor D., Lindquist, Martin A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3812660/
https://www.ncbi.nlm.nih.gov/pubmed/24198781
http://dx.doi.org/10.3389/fncom.2013.00143
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author Cribben, Ivor
Wager, Tor D.
Lindquist, Martin A.
author_facet Cribben, Ivor
Wager, Tor D.
Lindquist, Martin A.
author_sort Cribben, Ivor
collection PubMed
description Recently in functional magnetic resonance imaging (fMRI) studies there has been an increased interest in understanding the dynamic manner in which brain regions communicate with one another, as subjects perform a set of experimental tasks or as their psychological state changes. Dynamic Connectivity Regression (DCR) is a data-driven technique used for detecting temporal change points in functional connectivity between brain regions where the number and location of the change points are unknown a priori. After finding the change points, DCR estimates a graph or set of relationships between the brain regions for data that falls between pairs of change points. In previous work, the method was predominantly validated using multi-subject data. In this paper, we concentrate on single-subject data and introduce a new DCR algorithm. The new algorithm increases accuracy for individual subject data with a small number of observations and reduces the number of false positives in the estimated undirected graphs. We also introduce a new Likelihood Ratio test for comparing sparse graphs across (or within) subjects; thus allowing us to determine whether data should be combined across subjects. We perform an extensive simulation analysis on vector autoregression (VAR) data as well as to an fMRI data set from a study (n = 23) of a state anxiety induction using a socially evaluative threat challenge. The focus on single-subject data allows us to study the variation between individuals and may provide us with a deeper knowledge of the workings of the brain.
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spelling pubmed-38126602013-11-06 Detecting functional connectivity change points for single-subject fMRI data Cribben, Ivor Wager, Tor D. Lindquist, Martin A. Front Comput Neurosci Neuroscience Recently in functional magnetic resonance imaging (fMRI) studies there has been an increased interest in understanding the dynamic manner in which brain regions communicate with one another, as subjects perform a set of experimental tasks or as their psychological state changes. Dynamic Connectivity Regression (DCR) is a data-driven technique used for detecting temporal change points in functional connectivity between brain regions where the number and location of the change points are unknown a priori. After finding the change points, DCR estimates a graph or set of relationships between the brain regions for data that falls between pairs of change points. In previous work, the method was predominantly validated using multi-subject data. In this paper, we concentrate on single-subject data and introduce a new DCR algorithm. The new algorithm increases accuracy for individual subject data with a small number of observations and reduces the number of false positives in the estimated undirected graphs. We also introduce a new Likelihood Ratio test for comparing sparse graphs across (or within) subjects; thus allowing us to determine whether data should be combined across subjects. We perform an extensive simulation analysis on vector autoregression (VAR) data as well as to an fMRI data set from a study (n = 23) of a state anxiety induction using a socially evaluative threat challenge. The focus on single-subject data allows us to study the variation between individuals and may provide us with a deeper knowledge of the workings of the brain. Frontiers Media S.A. 2013-10-30 /pmc/articles/PMC3812660/ /pubmed/24198781 http://dx.doi.org/10.3389/fncom.2013.00143 Text en Copyright © 2013 Cribben, Wager and Lindquist. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Cribben, Ivor
Wager, Tor D.
Lindquist, Martin A.
Detecting functional connectivity change points for single-subject fMRI data
title Detecting functional connectivity change points for single-subject fMRI data
title_full Detecting functional connectivity change points for single-subject fMRI data
title_fullStr Detecting functional connectivity change points for single-subject fMRI data
title_full_unstemmed Detecting functional connectivity change points for single-subject fMRI data
title_short Detecting functional connectivity change points for single-subject fMRI data
title_sort detecting functional connectivity change points for single-subject fmri data
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3812660/
https://www.ncbi.nlm.nih.gov/pubmed/24198781
http://dx.doi.org/10.3389/fncom.2013.00143
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