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A Functional Variant rs1820453 in YAP1 and Breast Cancer Risk in Chinese Population

BACKGROUND: To investigate the association between rs1820453 which located in the promoter region of yes-associated protein 1 (YAP1) gene and breast cancer (BC) risk. METHOD AND FINDINGS: We conducted a hospital-based case-control study including a total of 480 BC cases and 545 cancer-free controls...

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Autores principales: Chen, Wei, Wang, Wei, Zhu, Beibei, Guo, Hui, Sun, Yu, Ming, Jie, Shen, Na, Li, Zhi, Wang, Zhenling, Liu, Lifeng, Cai, Bingxi, Duan, Jiayu, Li, Jiaoyuan, Liu, Cheng, Zhong, Rong, Hu, Weiguo, Huang, Tao, Miao, Xiaoping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3815349/
https://www.ncbi.nlm.nih.gov/pubmed/24223879
http://dx.doi.org/10.1371/journal.pone.0079056
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author Chen, Wei
Wang, Wei
Zhu, Beibei
Guo, Hui
Sun, Yu
Ming, Jie
Shen, Na
Li, Zhi
Wang, Zhenling
Liu, Lifeng
Cai, Bingxi
Duan, Jiayu
Li, Jiaoyuan
Liu, Cheng
Zhong, Rong
Hu, Weiguo
Huang, Tao
Miao, Xiaoping
author_facet Chen, Wei
Wang, Wei
Zhu, Beibei
Guo, Hui
Sun, Yu
Ming, Jie
Shen, Na
Li, Zhi
Wang, Zhenling
Liu, Lifeng
Cai, Bingxi
Duan, Jiayu
Li, Jiaoyuan
Liu, Cheng
Zhong, Rong
Hu, Weiguo
Huang, Tao
Miao, Xiaoping
author_sort Chen, Wei
collection PubMed
description BACKGROUND: To investigate the association between rs1820453 which located in the promoter region of yes-associated protein 1 (YAP1) gene and breast cancer (BC) risk. METHOD AND FINDINGS: We conducted a hospital-based case-control study including a total of 480 BC cases and 545 cancer-free controls in Chinese population. Then the expression quantitative trait locus (e-QTL) analysis was performed to explore the possible function of rs1820453 to the YAP1 gene expression. The association between rs1820453 and BC risk was significantly identified with the odds ratio (OR) was 1.27 (95 % confidence interval (CI) =1.03-1.57) under allelic model when adjusted by age and menopausal status. In addition, the correlation analysis of rs1820453 and YAP1 expression level found that this variant was significantly associated with the gene expression in Chinese population. When compared with level of mRNA expression of the AA genotype (6.011±0.046), the mRNA expression level in CC genotype (5.903±0.026) was statistically lower (P=0.024). CONCLUSION: The results from this study suggested that rs1820453 A>C change may affect the gene expression and contribute to the risk of developing BC in Chinese population though larger sample-size studies along with functional experiments were anticipated to warrant the results.
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spelling pubmed-38153492013-11-09 A Functional Variant rs1820453 in YAP1 and Breast Cancer Risk in Chinese Population Chen, Wei Wang, Wei Zhu, Beibei Guo, Hui Sun, Yu Ming, Jie Shen, Na Li, Zhi Wang, Zhenling Liu, Lifeng Cai, Bingxi Duan, Jiayu Li, Jiaoyuan Liu, Cheng Zhong, Rong Hu, Weiguo Huang, Tao Miao, Xiaoping PLoS One Research Article BACKGROUND: To investigate the association between rs1820453 which located in the promoter region of yes-associated protein 1 (YAP1) gene and breast cancer (BC) risk. METHOD AND FINDINGS: We conducted a hospital-based case-control study including a total of 480 BC cases and 545 cancer-free controls in Chinese population. Then the expression quantitative trait locus (e-QTL) analysis was performed to explore the possible function of rs1820453 to the YAP1 gene expression. The association between rs1820453 and BC risk was significantly identified with the odds ratio (OR) was 1.27 (95 % confidence interval (CI) =1.03-1.57) under allelic model when adjusted by age and menopausal status. In addition, the correlation analysis of rs1820453 and YAP1 expression level found that this variant was significantly associated with the gene expression in Chinese population. When compared with level of mRNA expression of the AA genotype (6.011±0.046), the mRNA expression level in CC genotype (5.903±0.026) was statistically lower (P=0.024). CONCLUSION: The results from this study suggested that rs1820453 A>C change may affect the gene expression and contribute to the risk of developing BC in Chinese population though larger sample-size studies along with functional experiments were anticipated to warrant the results. Public Library of Science 2013-11-01 /pmc/articles/PMC3815349/ /pubmed/24223879 http://dx.doi.org/10.1371/journal.pone.0079056 Text en © 2013 Chen et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Chen, Wei
Wang, Wei
Zhu, Beibei
Guo, Hui
Sun, Yu
Ming, Jie
Shen, Na
Li, Zhi
Wang, Zhenling
Liu, Lifeng
Cai, Bingxi
Duan, Jiayu
Li, Jiaoyuan
Liu, Cheng
Zhong, Rong
Hu, Weiguo
Huang, Tao
Miao, Xiaoping
A Functional Variant rs1820453 in YAP1 and Breast Cancer Risk in Chinese Population
title A Functional Variant rs1820453 in YAP1 and Breast Cancer Risk in Chinese Population
title_full A Functional Variant rs1820453 in YAP1 and Breast Cancer Risk in Chinese Population
title_fullStr A Functional Variant rs1820453 in YAP1 and Breast Cancer Risk in Chinese Population
title_full_unstemmed A Functional Variant rs1820453 in YAP1 and Breast Cancer Risk in Chinese Population
title_short A Functional Variant rs1820453 in YAP1 and Breast Cancer Risk in Chinese Population
title_sort functional variant rs1820453 in yap1 and breast cancer risk in chinese population
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3815349/
https://www.ncbi.nlm.nih.gov/pubmed/24223879
http://dx.doi.org/10.1371/journal.pone.0079056
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