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Global Transcriptome Analysis of Lactococcus garvieae Strains in Response to Temperature
Lactococcus garvieae is an important fish and an opportunistic human pathogen. The genomic sequences of several L. garvieae strains have been recently published, opening the possibility of global studies on the biology of this pathogen. In this study, a whole genome DNA microarray of two strains of...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3817100/ https://www.ncbi.nlm.nih.gov/pubmed/24223997 http://dx.doi.org/10.1371/journal.pone.0079692 |
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author | Aguado-Urda, Mónica Gibello, Alicia Blanco, M. del Mar Fernández-Garayzábal, José F. López-Alonso, Victoria López-Campos, Guillermo H. |
author_facet | Aguado-Urda, Mónica Gibello, Alicia Blanco, M. del Mar Fernández-Garayzábal, José F. López-Alonso, Victoria López-Campos, Guillermo H. |
author_sort | Aguado-Urda, Mónica |
collection | PubMed |
description | Lactococcus garvieae is an important fish and an opportunistic human pathogen. The genomic sequences of several L. garvieae strains have been recently published, opening the possibility of global studies on the biology of this pathogen. In this study, a whole genome DNA microarray of two strains of L. garvieae was designed and validated. This DNA microarray was used to investigate the effects of growth temperature (18°C and 37°C) on the transcriptome of two clinical strains of L. garvieae that were isolated from fish (Lg8831) and from a human case of septicemia (Lg21881). The transcriptome profiles evidenced a strain-specific response to temperature, which was more evident at 18°C. Among the most significant findings, Lg8831 was found to up-regulate at 18°C several genes encoding different cold-shock and cold-induced proteins involved in an efficient adaptive response of this strain to low-temperature conditions. Another relevant result was the description, for the first time, of respiratory metabolism in L. garvieae, whose gene expression regulation was temperature-dependent in Lg21881. This study provides new insights about how environmental factors such as temperature can affect L. garvieae gene expression. These data could improve our understanding of the regulatory networks and adaptive biology of this important pathogen. |
format | Online Article Text |
id | pubmed-3817100 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38171002013-11-09 Global Transcriptome Analysis of Lactococcus garvieae Strains in Response to Temperature Aguado-Urda, Mónica Gibello, Alicia Blanco, M. del Mar Fernández-Garayzábal, José F. López-Alonso, Victoria López-Campos, Guillermo H. PLoS One Research Article Lactococcus garvieae is an important fish and an opportunistic human pathogen. The genomic sequences of several L. garvieae strains have been recently published, opening the possibility of global studies on the biology of this pathogen. In this study, a whole genome DNA microarray of two strains of L. garvieae was designed and validated. This DNA microarray was used to investigate the effects of growth temperature (18°C and 37°C) on the transcriptome of two clinical strains of L. garvieae that were isolated from fish (Lg8831) and from a human case of septicemia (Lg21881). The transcriptome profiles evidenced a strain-specific response to temperature, which was more evident at 18°C. Among the most significant findings, Lg8831 was found to up-regulate at 18°C several genes encoding different cold-shock and cold-induced proteins involved in an efficient adaptive response of this strain to low-temperature conditions. Another relevant result was the description, for the first time, of respiratory metabolism in L. garvieae, whose gene expression regulation was temperature-dependent in Lg21881. This study provides new insights about how environmental factors such as temperature can affect L. garvieae gene expression. These data could improve our understanding of the regulatory networks and adaptive biology of this important pathogen. Public Library of Science 2013-11-04 /pmc/articles/PMC3817100/ /pubmed/24223997 http://dx.doi.org/10.1371/journal.pone.0079692 Text en © 2013 Aguado-Urda et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Aguado-Urda, Mónica Gibello, Alicia Blanco, M. del Mar Fernández-Garayzábal, José F. López-Alonso, Victoria López-Campos, Guillermo H. Global Transcriptome Analysis of Lactococcus garvieae Strains in Response to Temperature |
title | Global Transcriptome Analysis of Lactococcus garvieae Strains in Response to Temperature |
title_full | Global Transcriptome Analysis of Lactococcus garvieae Strains in Response to Temperature |
title_fullStr | Global Transcriptome Analysis of Lactococcus garvieae Strains in Response to Temperature |
title_full_unstemmed | Global Transcriptome Analysis of Lactococcus garvieae Strains in Response to Temperature |
title_short | Global Transcriptome Analysis of Lactococcus garvieae Strains in Response to Temperature |
title_sort | global transcriptome analysis of lactococcus garvieae strains in response to temperature |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3817100/ https://www.ncbi.nlm.nih.gov/pubmed/24223997 http://dx.doi.org/10.1371/journal.pone.0079692 |
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