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Bias in Diet Determination: Incorporating Traditional Methods in Bayesian Mixing Models

There are not “universal methods” to determine diet composition of predators. Most traditional methods are biased because of their reliance on differential digestibility and the recovery of hard items. By relying on assimilated food, stable isotope and Bayesian mixing models (SIMMs) resolve many bia...

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Autores principales: Franco-Trecu, Valentina, Drago, Massimiliano, Riet-Sapriza, Federico G., Parnell, Andrew, Frau, Rosina, Inchausti, Pablo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3818279/
https://www.ncbi.nlm.nih.gov/pubmed/24224031
http://dx.doi.org/10.1371/journal.pone.0080019
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author Franco-Trecu, Valentina
Drago, Massimiliano
Riet-Sapriza, Federico G.
Parnell, Andrew
Frau, Rosina
Inchausti, Pablo
author_facet Franco-Trecu, Valentina
Drago, Massimiliano
Riet-Sapriza, Federico G.
Parnell, Andrew
Frau, Rosina
Inchausti, Pablo
author_sort Franco-Trecu, Valentina
collection PubMed
description There are not “universal methods” to determine diet composition of predators. Most traditional methods are biased because of their reliance on differential digestibility and the recovery of hard items. By relying on assimilated food, stable isotope and Bayesian mixing models (SIMMs) resolve many biases of traditional methods. SIMMs can incorporate prior information (i.e. proportional diet composition) that may improve the precision in the estimated dietary composition. However few studies have assessed the performance of traditional methods and SIMMs with and without informative priors to study the predators’ diets. Here we compare the diet compositions of the South American fur seal and sea lions obtained by scats analysis and by SIMMs-UP (uninformative priors) and assess whether informative priors (SIMMs-IP) from the scat analysis improved the estimated diet composition compared to SIMMs-UP. According to the SIMM-UP, while pelagic species dominated the fur seal’s diet the sea lion’s did not have a clear dominance of any prey. In contrast, SIMM-IP’s diets compositions were dominated by the same preys as in scat analyses. When prior information influenced SIMMs’ estimates, incorporating informative priors improved the precision in the estimated diet composition at the risk of inducing biases in the estimates. If preys isotopic data allow discriminating preys’ contributions to diets, informative priors should lead to more precise but unbiased estimated diet composition. Just as estimates of diet composition obtained from traditional methods are critically interpreted because of their biases, care must be exercised when interpreting diet composition obtained by SIMMs-IP. The best approach to obtain a near-complete view of predators’ diet composition should involve the simultaneous consideration of different sources of partial evidence (traditional methods, SIMM-UP and SIMM-IP) in the light of natural history of the predator species so as to reliably ascertain and weight the information yielded by each method.
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spelling pubmed-38182792013-11-09 Bias in Diet Determination: Incorporating Traditional Methods in Bayesian Mixing Models Franco-Trecu, Valentina Drago, Massimiliano Riet-Sapriza, Federico G. Parnell, Andrew Frau, Rosina Inchausti, Pablo PLoS One Research Article There are not “universal methods” to determine diet composition of predators. Most traditional methods are biased because of their reliance on differential digestibility and the recovery of hard items. By relying on assimilated food, stable isotope and Bayesian mixing models (SIMMs) resolve many biases of traditional methods. SIMMs can incorporate prior information (i.e. proportional diet composition) that may improve the precision in the estimated dietary composition. However few studies have assessed the performance of traditional methods and SIMMs with and without informative priors to study the predators’ diets. Here we compare the diet compositions of the South American fur seal and sea lions obtained by scats analysis and by SIMMs-UP (uninformative priors) and assess whether informative priors (SIMMs-IP) from the scat analysis improved the estimated diet composition compared to SIMMs-UP. According to the SIMM-UP, while pelagic species dominated the fur seal’s diet the sea lion’s did not have a clear dominance of any prey. In contrast, SIMM-IP’s diets compositions were dominated by the same preys as in scat analyses. When prior information influenced SIMMs’ estimates, incorporating informative priors improved the precision in the estimated diet composition at the risk of inducing biases in the estimates. If preys isotopic data allow discriminating preys’ contributions to diets, informative priors should lead to more precise but unbiased estimated diet composition. Just as estimates of diet composition obtained from traditional methods are critically interpreted because of their biases, care must be exercised when interpreting diet composition obtained by SIMMs-IP. The best approach to obtain a near-complete view of predators’ diet composition should involve the simultaneous consideration of different sources of partial evidence (traditional methods, SIMM-UP and SIMM-IP) in the light of natural history of the predator species so as to reliably ascertain and weight the information yielded by each method. Public Library of Science 2013-11-05 /pmc/articles/PMC3818279/ /pubmed/24224031 http://dx.doi.org/10.1371/journal.pone.0080019 Text en © 2013 Franco-Trecu et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Franco-Trecu, Valentina
Drago, Massimiliano
Riet-Sapriza, Federico G.
Parnell, Andrew
Frau, Rosina
Inchausti, Pablo
Bias in Diet Determination: Incorporating Traditional Methods in Bayesian Mixing Models
title Bias in Diet Determination: Incorporating Traditional Methods in Bayesian Mixing Models
title_full Bias in Diet Determination: Incorporating Traditional Methods in Bayesian Mixing Models
title_fullStr Bias in Diet Determination: Incorporating Traditional Methods in Bayesian Mixing Models
title_full_unstemmed Bias in Diet Determination: Incorporating Traditional Methods in Bayesian Mixing Models
title_short Bias in Diet Determination: Incorporating Traditional Methods in Bayesian Mixing Models
title_sort bias in diet determination: incorporating traditional methods in bayesian mixing models
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3818279/
https://www.ncbi.nlm.nih.gov/pubmed/24224031
http://dx.doi.org/10.1371/journal.pone.0080019
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