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Northwestern University Schizophrenia Data and Software Tool (NUSDAST)

The schizophrenia research community has invested substantial resources on collecting, managing and sharing large neuroimaging datasets. As part of this effort, our group has collected high resolution magnetic resonance (MR) datasets from individuals with schizophrenia, their non-psychotic siblings,...

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Autores principales: Wang, Lei, Kogan, Alex, Cobia, Derin, Alpert, Kathryn, Kolasny, Anthony, Miller, Michael I., Marcus, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3819522/
https://www.ncbi.nlm.nih.gov/pubmed/24223551
http://dx.doi.org/10.3389/fninf.2013.00025
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author Wang, Lei
Kogan, Alex
Cobia, Derin
Alpert, Kathryn
Kolasny, Anthony
Miller, Michael I.
Marcus, Daniel
author_facet Wang, Lei
Kogan, Alex
Cobia, Derin
Alpert, Kathryn
Kolasny, Anthony
Miller, Michael I.
Marcus, Daniel
author_sort Wang, Lei
collection PubMed
description The schizophrenia research community has invested substantial resources on collecting, managing and sharing large neuroimaging datasets. As part of this effort, our group has collected high resolution magnetic resonance (MR) datasets from individuals with schizophrenia, their non-psychotic siblings, healthy controls and their siblings. This effort has resulted in a growing resource, the Northwestern University Schizophrenia Data and Software Tool (NUSDAST), an NIH-funded data sharing project to stimulate new research. This resource resides on XNAT Central, and it contains neuroimaging (MR scans, landmarks and surface maps for deep subcortical structures, and FreeSurfer cortical parcellation and measurement data), cognitive (cognitive domain scores for crystallized intelligence, working memory, episodic memory, and executive function), clinical (demographic, sibling relationship, SAPS and SANS psychopathology), and genetic (20 polymorphisms) data, collected from more than 450 subjects, most with 2-year longitudinal follow-up. A neuroimaging mapping, analysis and visualization software tool, CAWorks, is also part of this resource. Moreover, in making our existing neuroimaging data along with the associated meta-data and computational tools publically accessible, we have established a web-based information retrieval portal that allows the user to efficiently search the collection. This research-ready dataset meaningfully combines neuroimaging data with other relevant information, and it can be used to help facilitate advancing neuroimaging research. It is our hope that this effort will help to overcome some of the commonly recognized technical barriers in advancing neuroimaging research such as lack of local organization and standard descriptions.
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spelling pubmed-38195222013-11-09 Northwestern University Schizophrenia Data and Software Tool (NUSDAST) Wang, Lei Kogan, Alex Cobia, Derin Alpert, Kathryn Kolasny, Anthony Miller, Michael I. Marcus, Daniel Front Neuroinform Neuroscience The schizophrenia research community has invested substantial resources on collecting, managing and sharing large neuroimaging datasets. As part of this effort, our group has collected high resolution magnetic resonance (MR) datasets from individuals with schizophrenia, their non-psychotic siblings, healthy controls and their siblings. This effort has resulted in a growing resource, the Northwestern University Schizophrenia Data and Software Tool (NUSDAST), an NIH-funded data sharing project to stimulate new research. This resource resides on XNAT Central, and it contains neuroimaging (MR scans, landmarks and surface maps for deep subcortical structures, and FreeSurfer cortical parcellation and measurement data), cognitive (cognitive domain scores for crystallized intelligence, working memory, episodic memory, and executive function), clinical (demographic, sibling relationship, SAPS and SANS psychopathology), and genetic (20 polymorphisms) data, collected from more than 450 subjects, most with 2-year longitudinal follow-up. A neuroimaging mapping, analysis and visualization software tool, CAWorks, is also part of this resource. Moreover, in making our existing neuroimaging data along with the associated meta-data and computational tools publically accessible, we have established a web-based information retrieval portal that allows the user to efficiently search the collection. This research-ready dataset meaningfully combines neuroimaging data with other relevant information, and it can be used to help facilitate advancing neuroimaging research. It is our hope that this effort will help to overcome some of the commonly recognized technical barriers in advancing neuroimaging research such as lack of local organization and standard descriptions. Frontiers Media S.A. 2013-11-07 /pmc/articles/PMC3819522/ /pubmed/24223551 http://dx.doi.org/10.3389/fninf.2013.00025 Text en Copyright © 2013 Wang, Kogan, Cobia, Alpert, Kolasny, Miller and Marcus. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Wang, Lei
Kogan, Alex
Cobia, Derin
Alpert, Kathryn
Kolasny, Anthony
Miller, Michael I.
Marcus, Daniel
Northwestern University Schizophrenia Data and Software Tool (NUSDAST)
title Northwestern University Schizophrenia Data and Software Tool (NUSDAST)
title_full Northwestern University Schizophrenia Data and Software Tool (NUSDAST)
title_fullStr Northwestern University Schizophrenia Data and Software Tool (NUSDAST)
title_full_unstemmed Northwestern University Schizophrenia Data and Software Tool (NUSDAST)
title_short Northwestern University Schizophrenia Data and Software Tool (NUSDAST)
title_sort northwestern university schizophrenia data and software tool (nusdast)
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3819522/
https://www.ncbi.nlm.nih.gov/pubmed/24223551
http://dx.doi.org/10.3389/fninf.2013.00025
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