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Northwestern University Schizophrenia Data and Software Tool (NUSDAST)
The schizophrenia research community has invested substantial resources on collecting, managing and sharing large neuroimaging datasets. As part of this effort, our group has collected high resolution magnetic resonance (MR) datasets from individuals with schizophrenia, their non-psychotic siblings,...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3819522/ https://www.ncbi.nlm.nih.gov/pubmed/24223551 http://dx.doi.org/10.3389/fninf.2013.00025 |
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author | Wang, Lei Kogan, Alex Cobia, Derin Alpert, Kathryn Kolasny, Anthony Miller, Michael I. Marcus, Daniel |
author_facet | Wang, Lei Kogan, Alex Cobia, Derin Alpert, Kathryn Kolasny, Anthony Miller, Michael I. Marcus, Daniel |
author_sort | Wang, Lei |
collection | PubMed |
description | The schizophrenia research community has invested substantial resources on collecting, managing and sharing large neuroimaging datasets. As part of this effort, our group has collected high resolution magnetic resonance (MR) datasets from individuals with schizophrenia, their non-psychotic siblings, healthy controls and their siblings. This effort has resulted in a growing resource, the Northwestern University Schizophrenia Data and Software Tool (NUSDAST), an NIH-funded data sharing project to stimulate new research. This resource resides on XNAT Central, and it contains neuroimaging (MR scans, landmarks and surface maps for deep subcortical structures, and FreeSurfer cortical parcellation and measurement data), cognitive (cognitive domain scores for crystallized intelligence, working memory, episodic memory, and executive function), clinical (demographic, sibling relationship, SAPS and SANS psychopathology), and genetic (20 polymorphisms) data, collected from more than 450 subjects, most with 2-year longitudinal follow-up. A neuroimaging mapping, analysis and visualization software tool, CAWorks, is also part of this resource. Moreover, in making our existing neuroimaging data along with the associated meta-data and computational tools publically accessible, we have established a web-based information retrieval portal that allows the user to efficiently search the collection. This research-ready dataset meaningfully combines neuroimaging data with other relevant information, and it can be used to help facilitate advancing neuroimaging research. It is our hope that this effort will help to overcome some of the commonly recognized technical barriers in advancing neuroimaging research such as lack of local organization and standard descriptions. |
format | Online Article Text |
id | pubmed-3819522 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-38195222013-11-09 Northwestern University Schizophrenia Data and Software Tool (NUSDAST) Wang, Lei Kogan, Alex Cobia, Derin Alpert, Kathryn Kolasny, Anthony Miller, Michael I. Marcus, Daniel Front Neuroinform Neuroscience The schizophrenia research community has invested substantial resources on collecting, managing and sharing large neuroimaging datasets. As part of this effort, our group has collected high resolution magnetic resonance (MR) datasets from individuals with schizophrenia, their non-psychotic siblings, healthy controls and their siblings. This effort has resulted in a growing resource, the Northwestern University Schizophrenia Data and Software Tool (NUSDAST), an NIH-funded data sharing project to stimulate new research. This resource resides on XNAT Central, and it contains neuroimaging (MR scans, landmarks and surface maps for deep subcortical structures, and FreeSurfer cortical parcellation and measurement data), cognitive (cognitive domain scores for crystallized intelligence, working memory, episodic memory, and executive function), clinical (demographic, sibling relationship, SAPS and SANS psychopathology), and genetic (20 polymorphisms) data, collected from more than 450 subjects, most with 2-year longitudinal follow-up. A neuroimaging mapping, analysis and visualization software tool, CAWorks, is also part of this resource. Moreover, in making our existing neuroimaging data along with the associated meta-data and computational tools publically accessible, we have established a web-based information retrieval portal that allows the user to efficiently search the collection. This research-ready dataset meaningfully combines neuroimaging data with other relevant information, and it can be used to help facilitate advancing neuroimaging research. It is our hope that this effort will help to overcome some of the commonly recognized technical barriers in advancing neuroimaging research such as lack of local organization and standard descriptions. Frontiers Media S.A. 2013-11-07 /pmc/articles/PMC3819522/ /pubmed/24223551 http://dx.doi.org/10.3389/fninf.2013.00025 Text en Copyright © 2013 Wang, Kogan, Cobia, Alpert, Kolasny, Miller and Marcus. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Wang, Lei Kogan, Alex Cobia, Derin Alpert, Kathryn Kolasny, Anthony Miller, Michael I. Marcus, Daniel Northwestern University Schizophrenia Data and Software Tool (NUSDAST) |
title | Northwestern University Schizophrenia Data and Software Tool (NUSDAST) |
title_full | Northwestern University Schizophrenia Data and Software Tool (NUSDAST) |
title_fullStr | Northwestern University Schizophrenia Data and Software Tool (NUSDAST) |
title_full_unstemmed | Northwestern University Schizophrenia Data and Software Tool (NUSDAST) |
title_short | Northwestern University Schizophrenia Data and Software Tool (NUSDAST) |
title_sort | northwestern university schizophrenia data and software tool (nusdast) |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3819522/ https://www.ncbi.nlm.nih.gov/pubmed/24223551 http://dx.doi.org/10.3389/fninf.2013.00025 |
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