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Kinome Profiling

The use of arrays in genomics has led to a fast and reliable way to screen the transcriptome of an organism. It can be automated and analysis tools have become available and hence the technique has become widely used within the past few years. Signal-transduction routes rely mainly on the phosphoryl...

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Autor principal: Peppelenbosch, Maikel P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3820527/
https://www.ncbi.nlm.nih.gov/pubmed/24278683
http://dx.doi.org/10.6064/2012/306798
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author Peppelenbosch, Maikel P.
author_facet Peppelenbosch, Maikel P.
author_sort Peppelenbosch, Maikel P.
collection PubMed
description The use of arrays in genomics has led to a fast and reliable way to screen the transcriptome of an organism. It can be automated and analysis tools have become available and hence the technique has become widely used within the past few years. Signal-transduction routes rely mainly on the phosphorylation status of already available proteins; therefore kinases are central players in signal-transduction routes. The array technology can now also be used for the analysis of the kinome. To enable array analysis, consensus peptides for kinases are spot on a solid support. After incubation with cell lysates and in the presence of radioactive ATP, radioactive peptides can be visualized and the kinases that are active in the cells can be determined. The present paper reviews comprehensively the different kinome array platforms available and results obtained hitherto using such platforms. It will appear that this technology does not disappoint its high expectations and is especially powerful because of its species independence. Nevertheless, improvements are still possible and I shall also sketch future possible directions.
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spelling pubmed-38205272013-11-25 Kinome Profiling Peppelenbosch, Maikel P. Scientifica (Cairo) Review Article The use of arrays in genomics has led to a fast and reliable way to screen the transcriptome of an organism. It can be automated and analysis tools have become available and hence the technique has become widely used within the past few years. Signal-transduction routes rely mainly on the phosphorylation status of already available proteins; therefore kinases are central players in signal-transduction routes. The array technology can now also be used for the analysis of the kinome. To enable array analysis, consensus peptides for kinases are spot on a solid support. After incubation with cell lysates and in the presence of radioactive ATP, radioactive peptides can be visualized and the kinases that are active in the cells can be determined. The present paper reviews comprehensively the different kinome array platforms available and results obtained hitherto using such platforms. It will appear that this technology does not disappoint its high expectations and is especially powerful because of its species independence. Nevertheless, improvements are still possible and I shall also sketch future possible directions. Hindawi Publishing Corporation 2012 2012-08-07 /pmc/articles/PMC3820527/ /pubmed/24278683 http://dx.doi.org/10.6064/2012/306798 Text en Copyright © 2012 Maikel P. Peppelenbosch. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review Article
Peppelenbosch, Maikel P.
Kinome Profiling
title Kinome Profiling
title_full Kinome Profiling
title_fullStr Kinome Profiling
title_full_unstemmed Kinome Profiling
title_short Kinome Profiling
title_sort kinome profiling
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3820527/
https://www.ncbi.nlm.nih.gov/pubmed/24278683
http://dx.doi.org/10.6064/2012/306798
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