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Inference of Structure Ensembles of Flexible Biomolecules from Sparse, Averaged Data

We present the theoretical foundations of a general principle to infer structure ensembles of flexible biomolecules from spatially and temporally averaged data obtained in biophysical experiments. The central idea is to compute the Kullback-Leibler optimal modification of a given prior distribution...

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Detalles Bibliográficos
Autores principales: Olsson, Simon, Frellsen, Jes, Boomsma, Wouter, Mardia, Kanti V., Hamelryck, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3820694/
https://www.ncbi.nlm.nih.gov/pubmed/24244505
http://dx.doi.org/10.1371/journal.pone.0079439
Descripción
Sumario:We present the theoretical foundations of a general principle to infer structure ensembles of flexible biomolecules from spatially and temporally averaged data obtained in biophysical experiments. The central idea is to compute the Kullback-Leibler optimal modification of a given prior distribution [Image: see text] with respect to the experimental data and its uncertainty. This principle generalizes the successful inferential structure determination method and recently proposed maximum entropy methods. Tractability of the protocol is demonstrated through the analysis of simulated nuclear magnetic resonance spectroscopy data of a small peptide.