Cargando…

Eleven Novel Polymorphic Microsatellite Loci for Oval Squid Sepioteuthis Lessoniana (Shiro-Ika Type)

The oval squid Sepioteuthis lessoniana is one of the most economically important squid species in Japan; however, its population structure is poorly understood due to the lack of hypervariable markers. Such information is critical for managing sustainable fisheries, as well as for ensuring the exist...

Descripción completa

Detalles Bibliográficos
Autores principales: Tomano, Satoshi, Ahmad-Syazni, Kamarudin, Ueta, Yukio, Ohara, Kenichi, Umino, Tetsuya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3821597/
https://www.ncbi.nlm.nih.gov/pubmed/24108369
http://dx.doi.org/10.3390/ijms141019971
_version_ 1782290324287127552
author Tomano, Satoshi
Ahmad-Syazni, Kamarudin
Ueta, Yukio
Ohara, Kenichi
Umino, Tetsuya
author_facet Tomano, Satoshi
Ahmad-Syazni, Kamarudin
Ueta, Yukio
Ohara, Kenichi
Umino, Tetsuya
author_sort Tomano, Satoshi
collection PubMed
description The oval squid Sepioteuthis lessoniana is one of the most economically important squid species in Japan; however, its population structure is poorly understood due to the lack of hypervariable markers. Such information is critical for managing sustainable fisheries, as well as for ensuring the existence of wild S. lessoniana stocks. Eleven candidate microsatellite loci were isolated from a small insert genomic DNA library. Polymorphisms in these 11 loci were screened in 24 wild individuals. The number of alleles per locus was found to range from 5 to 19 alleles, and the observed heterozygosity ranged from 0.292 to 0.958. No evidence for linkage disequilibrium was detected among all the loci. The genotypic proportions conformed to Hardy-Weinberg equilibrium, except at one locus. In conclusion, these polymorphic microsatellite loci may be used to develop a genetic framework to manage S. lessoniana in the future.
format Online
Article
Text
id pubmed-3821597
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Molecular Diversity Preservation International (MDPI)
record_format MEDLINE/PubMed
spelling pubmed-38215972013-11-11 Eleven Novel Polymorphic Microsatellite Loci for Oval Squid Sepioteuthis Lessoniana (Shiro-Ika Type) Tomano, Satoshi Ahmad-Syazni, Kamarudin Ueta, Yukio Ohara, Kenichi Umino, Tetsuya Int J Mol Sci Short Note The oval squid Sepioteuthis lessoniana is one of the most economically important squid species in Japan; however, its population structure is poorly understood due to the lack of hypervariable markers. Such information is critical for managing sustainable fisheries, as well as for ensuring the existence of wild S. lessoniana stocks. Eleven candidate microsatellite loci were isolated from a small insert genomic DNA library. Polymorphisms in these 11 loci were screened in 24 wild individuals. The number of alleles per locus was found to range from 5 to 19 alleles, and the observed heterozygosity ranged from 0.292 to 0.958. No evidence for linkage disequilibrium was detected among all the loci. The genotypic proportions conformed to Hardy-Weinberg equilibrium, except at one locus. In conclusion, these polymorphic microsatellite loci may be used to develop a genetic framework to manage S. lessoniana in the future. Molecular Diversity Preservation International (MDPI) 2013-10-08 /pmc/articles/PMC3821597/ /pubmed/24108369 http://dx.doi.org/10.3390/ijms141019971 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Short Note
Tomano, Satoshi
Ahmad-Syazni, Kamarudin
Ueta, Yukio
Ohara, Kenichi
Umino, Tetsuya
Eleven Novel Polymorphic Microsatellite Loci for Oval Squid Sepioteuthis Lessoniana (Shiro-Ika Type)
title Eleven Novel Polymorphic Microsatellite Loci for Oval Squid Sepioteuthis Lessoniana (Shiro-Ika Type)
title_full Eleven Novel Polymorphic Microsatellite Loci for Oval Squid Sepioteuthis Lessoniana (Shiro-Ika Type)
title_fullStr Eleven Novel Polymorphic Microsatellite Loci for Oval Squid Sepioteuthis Lessoniana (Shiro-Ika Type)
title_full_unstemmed Eleven Novel Polymorphic Microsatellite Loci for Oval Squid Sepioteuthis Lessoniana (Shiro-Ika Type)
title_short Eleven Novel Polymorphic Microsatellite Loci for Oval Squid Sepioteuthis Lessoniana (Shiro-Ika Type)
title_sort eleven novel polymorphic microsatellite loci for oval squid sepioteuthis lessoniana (shiro-ika type)
topic Short Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3821597/
https://www.ncbi.nlm.nih.gov/pubmed/24108369
http://dx.doi.org/10.3390/ijms141019971
work_keys_str_mv AT tomanosatoshi elevennovelpolymorphicmicrosatellitelociforovalsquidsepioteuthislessonianashiroikatype
AT ahmadsyaznikamarudin elevennovelpolymorphicmicrosatellitelociforovalsquidsepioteuthislessonianashiroikatype
AT uetayukio elevennovelpolymorphicmicrosatellitelociforovalsquidsepioteuthislessonianashiroikatype
AT oharakenichi elevennovelpolymorphicmicrosatellitelociforovalsquidsepioteuthislessonianashiroikatype
AT uminotetsuya elevennovelpolymorphicmicrosatellitelociforovalsquidsepioteuthislessonianashiroikatype