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Targeted exome capture and sequencing identifies novel PRPF31 mutations in autosomal dominant retinitis pigmentosa in Chinese families

OBJECTIVES: To identify disease-causing mutations in two Chinese families with autosomal dominant retinitis pigmentosa (adRP). DESIGN: Prospective analysis. PATIENTS: Two Chinese adRP families underwent genetic diagnosis. A specific hereditary eye disease enrichment panel (HEDEP) based on targeted e...

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Autores principales: Yang, Liping, Yin, Xiaobei, Wu, Lemeng, Chen, Ningning, Zhang, Huirong, Li, Genlin, Ma, Zhizhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3822309/
https://www.ncbi.nlm.nih.gov/pubmed/24202059
http://dx.doi.org/10.1136/bmjopen-2013-004030
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author Yang, Liping
Yin, Xiaobei
Wu, Lemeng
Chen, Ningning
Zhang, Huirong
Li, Genlin
Ma, Zhizhong
author_facet Yang, Liping
Yin, Xiaobei
Wu, Lemeng
Chen, Ningning
Zhang, Huirong
Li, Genlin
Ma, Zhizhong
author_sort Yang, Liping
collection PubMed
description OBJECTIVES: To identify disease-causing mutations in two Chinese families with autosomal dominant retinitis pigmentosa (adRP). DESIGN: Prospective analysis. PATIENTS: Two Chinese adRP families underwent genetic diagnosis. A specific hereditary eye disease enrichment panel (HEDEP) based on targeted exome capture technology was used to collect the protein coding regions of targeted 371 hereditary eye disease genes; high throughput sequencing was done with the Illumina HiSeq 2000 platform. The identified variants were confirmed with Sanger sequencing. SETTING: All experiments were performed in a large laboratory specialising in genetic studies in the Department of Ophthalmology, Peking University Third Hospital. RESULTS: Two novel mutations, including one splice site mutation (Int10 c.1074-2 A>T; p.Y359SfsX29) and one insertion (c.824_825insA; p.Y275X) of PRPF31 were identified in the two families. The two mutations segregated with the disease phenotype in their respective families. CONCLUSIONS: Our findings broaden the spectrum of PRPF31 mutations causing adRP and the phenotypic spectrum of the disease in Chinese patients. The HEDEP based on targeted exome capture technology is an efficient method for molecular diagnosis in adRP patients.
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spelling pubmed-38223092013-11-12 Targeted exome capture and sequencing identifies novel PRPF31 mutations in autosomal dominant retinitis pigmentosa in Chinese families Yang, Liping Yin, Xiaobei Wu, Lemeng Chen, Ningning Zhang, Huirong Li, Genlin Ma, Zhizhong BMJ Open Ophthalmology OBJECTIVES: To identify disease-causing mutations in two Chinese families with autosomal dominant retinitis pigmentosa (adRP). DESIGN: Prospective analysis. PATIENTS: Two Chinese adRP families underwent genetic diagnosis. A specific hereditary eye disease enrichment panel (HEDEP) based on targeted exome capture technology was used to collect the protein coding regions of targeted 371 hereditary eye disease genes; high throughput sequencing was done with the Illumina HiSeq 2000 platform. The identified variants were confirmed with Sanger sequencing. SETTING: All experiments were performed in a large laboratory specialising in genetic studies in the Department of Ophthalmology, Peking University Third Hospital. RESULTS: Two novel mutations, including one splice site mutation (Int10 c.1074-2 A>T; p.Y359SfsX29) and one insertion (c.824_825insA; p.Y275X) of PRPF31 were identified in the two families. The two mutations segregated with the disease phenotype in their respective families. CONCLUSIONS: Our findings broaden the spectrum of PRPF31 mutations causing adRP and the phenotypic spectrum of the disease in Chinese patients. The HEDEP based on targeted exome capture technology is an efficient method for molecular diagnosis in adRP patients. BMJ Publishing Group 2013-11-06 /pmc/articles/PMC3822309/ /pubmed/24202059 http://dx.doi.org/10.1136/bmjopen-2013-004030 Text en Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions This is an Open Access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 3.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. See: http://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Ophthalmology
Yang, Liping
Yin, Xiaobei
Wu, Lemeng
Chen, Ningning
Zhang, Huirong
Li, Genlin
Ma, Zhizhong
Targeted exome capture and sequencing identifies novel PRPF31 mutations in autosomal dominant retinitis pigmentosa in Chinese families
title Targeted exome capture and sequencing identifies novel PRPF31 mutations in autosomal dominant retinitis pigmentosa in Chinese families
title_full Targeted exome capture and sequencing identifies novel PRPF31 mutations in autosomal dominant retinitis pigmentosa in Chinese families
title_fullStr Targeted exome capture and sequencing identifies novel PRPF31 mutations in autosomal dominant retinitis pigmentosa in Chinese families
title_full_unstemmed Targeted exome capture and sequencing identifies novel PRPF31 mutations in autosomal dominant retinitis pigmentosa in Chinese families
title_short Targeted exome capture and sequencing identifies novel PRPF31 mutations in autosomal dominant retinitis pigmentosa in Chinese families
title_sort targeted exome capture and sequencing identifies novel prpf31 mutations in autosomal dominant retinitis pigmentosa in chinese families
topic Ophthalmology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3822309/
https://www.ncbi.nlm.nih.gov/pubmed/24202059
http://dx.doi.org/10.1136/bmjopen-2013-004030
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