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Unlocking the potential of survival data for model organisms through a new database and online analysis platform: SurvCurv

Lifespan measurements, also called survival records, are a key phenotype in research on aging. If external hazards are excluded, aging alone determines the mortality in a population of model organisms. Understanding the biology of aging is highly desirable because of the benefits for the wide range...

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Detalles Bibliográficos
Autores principales: Ziehm, Matthias, Thornton, Janet M
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3824079/
https://www.ncbi.nlm.nih.gov/pubmed/23826631
http://dx.doi.org/10.1111/acel.12121
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author Ziehm, Matthias
Thornton, Janet M
author_facet Ziehm, Matthias
Thornton, Janet M
author_sort Ziehm, Matthias
collection PubMed
description Lifespan measurements, also called survival records, are a key phenotype in research on aging. If external hazards are excluded, aging alone determines the mortality in a population of model organisms. Understanding the biology of aging is highly desirable because of the benefits for the wide range of aging-related diseases. However, it is also extremely challenging because of the underlying complexity. Here, we describe SurvCurv, a new database and online resource focused on model organisms collating survival data for storage and analysis. All data in SurvCurv are manually curated and annotated. The database, available at http://www.ebi.ac.uk/thornton-srv/databases/SurvCurv/, offers various functions including plotting, Cox proportional hazards analysis, mathematical mortality models and statistical tests. It facilitates reanalysis and allows users to analyse their own data and compare it with the largest repository of model-organism data from published experiments, thus unlocking the potential of survival data and demographics in model organisms.
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spelling pubmed-38240792013-11-14 Unlocking the potential of survival data for model organisms through a new database and online analysis platform: SurvCurv Ziehm, Matthias Thornton, Janet M Aging Cell Original Articles Lifespan measurements, also called survival records, are a key phenotype in research on aging. If external hazards are excluded, aging alone determines the mortality in a population of model organisms. Understanding the biology of aging is highly desirable because of the benefits for the wide range of aging-related diseases. However, it is also extremely challenging because of the underlying complexity. Here, we describe SurvCurv, a new database and online resource focused on model organisms collating survival data for storage and analysis. All data in SurvCurv are manually curated and annotated. The database, available at http://www.ebi.ac.uk/thornton-srv/databases/SurvCurv/, offers various functions including plotting, Cox proportional hazards analysis, mathematical mortality models and statistical tests. It facilitates reanalysis and allows users to analyse their own data and compare it with the largest repository of model-organism data from published experiments, thus unlocking the potential of survival data and demographics in model organisms. Blackwell Publishing Ltd 2013-10 2013-07-22 /pmc/articles/PMC3824079/ /pubmed/23826631 http://dx.doi.org/10.1111/acel.12121 Text en © 2013 The Anatomical Society and John Wiley & Sons Ltd http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open access article under the terms of the Creative Commons License, which permits use and distribution in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Ziehm, Matthias
Thornton, Janet M
Unlocking the potential of survival data for model organisms through a new database and online analysis platform: SurvCurv
title Unlocking the potential of survival data for model organisms through a new database and online analysis platform: SurvCurv
title_full Unlocking the potential of survival data for model organisms through a new database and online analysis platform: SurvCurv
title_fullStr Unlocking the potential of survival data for model organisms through a new database and online analysis platform: SurvCurv
title_full_unstemmed Unlocking the potential of survival data for model organisms through a new database and online analysis platform: SurvCurv
title_short Unlocking the potential of survival data for model organisms through a new database and online analysis platform: SurvCurv
title_sort unlocking the potential of survival data for model organisms through a new database and online analysis platform: survcurv
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3824079/
https://www.ncbi.nlm.nih.gov/pubmed/23826631
http://dx.doi.org/10.1111/acel.12121
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