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Model-Based Pancreas Segmentation in Portal Venous Phase Contrast-Enhanced CT Images

This study aims to automatically detect and segment the pancreas in portal venous phase contrast-enhanced computed tomography (CT) images. The institutional review board of the University of Erlangen-Nuremberg approved this study and waived the need for informed consent. Discriminative learning is u...

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Autores principales: Hammon, Matthias, Cavallaro, Alexander, Erdt, Marius, Dankerl, Peter, Kirschner, Matthias, Drechsler, Klaus, Wesarg, Stefan, Uder, Michael, Janka, Rolf
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3824921/
https://www.ncbi.nlm.nih.gov/pubmed/23471751
http://dx.doi.org/10.1007/s10278-013-9586-7
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author Hammon, Matthias
Cavallaro, Alexander
Erdt, Marius
Dankerl, Peter
Kirschner, Matthias
Drechsler, Klaus
Wesarg, Stefan
Uder, Michael
Janka, Rolf
author_facet Hammon, Matthias
Cavallaro, Alexander
Erdt, Marius
Dankerl, Peter
Kirschner, Matthias
Drechsler, Klaus
Wesarg, Stefan
Uder, Michael
Janka, Rolf
author_sort Hammon, Matthias
collection PubMed
description This study aims to automatically detect and segment the pancreas in portal venous phase contrast-enhanced computed tomography (CT) images. The institutional review board of the University of Erlangen-Nuremberg approved this study and waived the need for informed consent. Discriminative learning is used to build a pancreas tissue classifier incorporating spatial relationships between the pancreas and surrounding organs and vessels. Furthermore, discrete cosine and wavelet transforms are used to build texture features to describe local tissue appearance. Classification is used to guide a constrained statistical shape model to fit the data. The algorithm to detect and segment the pancreas was evaluated on 40 consecutive CT data that were acquired in the portal venous contrast agent phase. Manual segmentation of the pancreas was carried out by experienced radiologists and served as reference standard. Threefold cross validation was performed. The algorithm-based detection and segmentation yielded an average surface distance of 1.7 mm and an average overlap of 61.2 % compared with the reference standard. The overall runtime of the system was 20.4 min. The presented novel approach enables automatic pancreas segmentation in portal venous phase contrast-enhanced CT images which are included in almost every clinical routine abdominal CT examination. Reliable pancreatic segmentation is crucial for computer-aided detection systems and an organ-specific decision support.
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spelling pubmed-38249212013-11-19 Model-Based Pancreas Segmentation in Portal Venous Phase Contrast-Enhanced CT Images Hammon, Matthias Cavallaro, Alexander Erdt, Marius Dankerl, Peter Kirschner, Matthias Drechsler, Klaus Wesarg, Stefan Uder, Michael Janka, Rolf J Digit Imaging Article This study aims to automatically detect and segment the pancreas in portal venous phase contrast-enhanced computed tomography (CT) images. The institutional review board of the University of Erlangen-Nuremberg approved this study and waived the need for informed consent. Discriminative learning is used to build a pancreas tissue classifier incorporating spatial relationships between the pancreas and surrounding organs and vessels. Furthermore, discrete cosine and wavelet transforms are used to build texture features to describe local tissue appearance. Classification is used to guide a constrained statistical shape model to fit the data. The algorithm to detect and segment the pancreas was evaluated on 40 consecutive CT data that were acquired in the portal venous contrast agent phase. Manual segmentation of the pancreas was carried out by experienced radiologists and served as reference standard. Threefold cross validation was performed. The algorithm-based detection and segmentation yielded an average surface distance of 1.7 mm and an average overlap of 61.2 % compared with the reference standard. The overall runtime of the system was 20.4 min. The presented novel approach enables automatic pancreas segmentation in portal venous phase contrast-enhanced CT images which are included in almost every clinical routine abdominal CT examination. Reliable pancreatic segmentation is crucial for computer-aided detection systems and an organ-specific decision support. Springer US 2013-03-08 2013-12 /pmc/articles/PMC3824921/ /pubmed/23471751 http://dx.doi.org/10.1007/s10278-013-9586-7 Text en © The Author(s) 2013 https://creativecommons.org/licenses/by-nc/2.0/ Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited.
spellingShingle Article
Hammon, Matthias
Cavallaro, Alexander
Erdt, Marius
Dankerl, Peter
Kirschner, Matthias
Drechsler, Klaus
Wesarg, Stefan
Uder, Michael
Janka, Rolf
Model-Based Pancreas Segmentation in Portal Venous Phase Contrast-Enhanced CT Images
title Model-Based Pancreas Segmentation in Portal Venous Phase Contrast-Enhanced CT Images
title_full Model-Based Pancreas Segmentation in Portal Venous Phase Contrast-Enhanced CT Images
title_fullStr Model-Based Pancreas Segmentation in Portal Venous Phase Contrast-Enhanced CT Images
title_full_unstemmed Model-Based Pancreas Segmentation in Portal Venous Phase Contrast-Enhanced CT Images
title_short Model-Based Pancreas Segmentation in Portal Venous Phase Contrast-Enhanced CT Images
title_sort model-based pancreas segmentation in portal venous phase contrast-enhanced ct images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3824921/
https://www.ncbi.nlm.nih.gov/pubmed/23471751
http://dx.doi.org/10.1007/s10278-013-9586-7
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