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Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil
Three acidophilic actinobacteria, isolates LSCA2, FGG8 and HSCA14(T), recovered from spruce litter were examined using a polyphasic approach. Chemotaxonomic and morphological properties of the isolates were found to be consistent with their classification in the genus Streptacidiphilus. The isolates...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Netherlands
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3825294/ https://www.ncbi.nlm.nih.gov/pubmed/23989983 http://dx.doi.org/10.1007/s10482-013-0015-1 |
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author | Golinska, Patrycja Kim, Byung-Yong Dahm, Hanna Goodfellow, Michael |
author_facet | Golinska, Patrycja Kim, Byung-Yong Dahm, Hanna Goodfellow, Michael |
author_sort | Golinska, Patrycja |
collection | PubMed |
description | Three acidophilic actinobacteria, isolates LSCA2, FGG8 and HSCA14(T), recovered from spruce litter were examined using a polyphasic approach. Chemotaxonomic and morphological properties of the isolates were found to be consistent with their classification in the genus Streptacidiphilus. The isolates were shown to have identical 16S rRNA gene sequences and were most closely related to Streptacidiphilus neutrinimicus DSM 41755(T) (99.9 % similarity). However, DNA:DNA relatedness between isolate HSCA14(T) and the type strain of S. neutrinimicus was found to be low at 44.0 (±14.1) %. A combination of phenotypic features, including degradative and nutritional characteristics were shown to distinguish the isolates from their nearest phylogenetic neighbours. Data from this study show that the isolates form a novel species in the genus for which the name S. hamsterleyensis sp. nov. is proposed. The type strain is HSCA 14(T) (=DSM 45900(T) = KACC 17456(T) = NCIMB 14865(T)). ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10482-013-0015-1) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-3825294 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Springer Netherlands |
record_format | MEDLINE/PubMed |
spelling | pubmed-38252942013-11-21 Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil Golinska, Patrycja Kim, Byung-Yong Dahm, Hanna Goodfellow, Michael Antonie Van Leeuwenhoek Original Paper Three acidophilic actinobacteria, isolates LSCA2, FGG8 and HSCA14(T), recovered from spruce litter were examined using a polyphasic approach. Chemotaxonomic and morphological properties of the isolates were found to be consistent with their classification in the genus Streptacidiphilus. The isolates were shown to have identical 16S rRNA gene sequences and were most closely related to Streptacidiphilus neutrinimicus DSM 41755(T) (99.9 % similarity). However, DNA:DNA relatedness between isolate HSCA14(T) and the type strain of S. neutrinimicus was found to be low at 44.0 (±14.1) %. A combination of phenotypic features, including degradative and nutritional characteristics were shown to distinguish the isolates from their nearest phylogenetic neighbours. Data from this study show that the isolates form a novel species in the genus for which the name S. hamsterleyensis sp. nov. is proposed. The type strain is HSCA 14(T) (=DSM 45900(T) = KACC 17456(T) = NCIMB 14865(T)). ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10482-013-0015-1) contains supplementary material, which is available to authorized users. Springer Netherlands 2013-08-30 2013 /pmc/articles/PMC3825294/ /pubmed/23989983 http://dx.doi.org/10.1007/s10482-013-0015-1 Text en © The Author(s) 2013 https://creativecommons.org/licenses/by/2.0/ Open AccessThis article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Original Paper Golinska, Patrycja Kim, Byung-Yong Dahm, Hanna Goodfellow, Michael Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil |
title | Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil |
title_full | Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil |
title_fullStr | Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil |
title_full_unstemmed | Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil |
title_short | Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil |
title_sort | streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3825294/ https://www.ncbi.nlm.nih.gov/pubmed/23989983 http://dx.doi.org/10.1007/s10482-013-0015-1 |
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