Cargando…

Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil

Three acidophilic actinobacteria, isolates LSCA2, FGG8 and HSCA14(T), recovered from spruce litter were examined using a polyphasic approach. Chemotaxonomic and morphological properties of the isolates were found to be consistent with their classification in the genus Streptacidiphilus. The isolates...

Descripción completa

Detalles Bibliográficos
Autores principales: Golinska, Patrycja, Kim, Byung-Yong, Dahm, Hanna, Goodfellow, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3825294/
https://www.ncbi.nlm.nih.gov/pubmed/23989983
http://dx.doi.org/10.1007/s10482-013-0015-1
_version_ 1782290794014572544
author Golinska, Patrycja
Kim, Byung-Yong
Dahm, Hanna
Goodfellow, Michael
author_facet Golinska, Patrycja
Kim, Byung-Yong
Dahm, Hanna
Goodfellow, Michael
author_sort Golinska, Patrycja
collection PubMed
description Three acidophilic actinobacteria, isolates LSCA2, FGG8 and HSCA14(T), recovered from spruce litter were examined using a polyphasic approach. Chemotaxonomic and morphological properties of the isolates were found to be consistent with their classification in the genus Streptacidiphilus. The isolates were shown to have identical 16S rRNA gene sequences and were most closely related to Streptacidiphilus neutrinimicus DSM 41755(T) (99.9 % similarity). However, DNA:DNA relatedness between isolate HSCA14(T) and the type strain of S. neutrinimicus was found to be low at 44.0 (±14.1) %. A combination of phenotypic features, including degradative and nutritional characteristics were shown to distinguish the isolates from their nearest phylogenetic neighbours. Data from this study show that the isolates form a novel species in the genus for which the name S. hamsterleyensis sp. nov. is proposed. The type strain is HSCA 14(T) (=DSM 45900(T) = KACC 17456(T) = NCIMB 14865(T)). ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10482-013-0015-1) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-3825294
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher Springer Netherlands
record_format MEDLINE/PubMed
spelling pubmed-38252942013-11-21 Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil Golinska, Patrycja Kim, Byung-Yong Dahm, Hanna Goodfellow, Michael Antonie Van Leeuwenhoek Original Paper Three acidophilic actinobacteria, isolates LSCA2, FGG8 and HSCA14(T), recovered from spruce litter were examined using a polyphasic approach. Chemotaxonomic and morphological properties of the isolates were found to be consistent with their classification in the genus Streptacidiphilus. The isolates were shown to have identical 16S rRNA gene sequences and were most closely related to Streptacidiphilus neutrinimicus DSM 41755(T) (99.9 % similarity). However, DNA:DNA relatedness between isolate HSCA14(T) and the type strain of S. neutrinimicus was found to be low at 44.0 (±14.1) %. A combination of phenotypic features, including degradative and nutritional characteristics were shown to distinguish the isolates from their nearest phylogenetic neighbours. Data from this study show that the isolates form a novel species in the genus for which the name S. hamsterleyensis sp. nov. is proposed. The type strain is HSCA 14(T) (=DSM 45900(T) = KACC 17456(T) = NCIMB 14865(T)). ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10482-013-0015-1) contains supplementary material, which is available to authorized users. Springer Netherlands 2013-08-30 2013 /pmc/articles/PMC3825294/ /pubmed/23989983 http://dx.doi.org/10.1007/s10482-013-0015-1 Text en © The Author(s) 2013 https://creativecommons.org/licenses/by/2.0/ Open AccessThis article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited.
spellingShingle Original Paper
Golinska, Patrycja
Kim, Byung-Yong
Dahm, Hanna
Goodfellow, Michael
Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil
title Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil
title_full Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil
title_fullStr Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil
title_full_unstemmed Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil
title_short Streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil
title_sort streptacidiphilus hamsterleyensis sp. nov., isolated from a spruce forest soil
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3825294/
https://www.ncbi.nlm.nih.gov/pubmed/23989983
http://dx.doi.org/10.1007/s10482-013-0015-1
work_keys_str_mv AT golinskapatrycja streptacidiphilushamsterleyensisspnovisolatedfromaspruceforestsoil
AT kimbyungyong streptacidiphilushamsterleyensisspnovisolatedfromaspruceforestsoil
AT dahmhanna streptacidiphilushamsterleyensisspnovisolatedfromaspruceforestsoil
AT goodfellowmichael streptacidiphilushamsterleyensisspnovisolatedfromaspruceforestsoil