Cargando…
Alzheimer's Disease Risk Assessment Using Large-Scale Machine Learning Methods
The goal of this work is to introduce new metrics to assess risk of Alzheimer's disease (AD) which we call AD Pattern Similarity (AD-PS) scores. These metrics are the conditional probabilities modeled by large-scale regularized logistic regression. The AD-PS scores derived from structural MRI a...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2013
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3826736/ https://www.ncbi.nlm.nih.gov/pubmed/24250789 http://dx.doi.org/10.1371/journal.pone.0077949 |
_version_ | 1782290951458258944 |
---|---|
author | Casanova, Ramon Hsu, Fang-Chi Sink, Kaycee M. Rapp, Stephen R. Williamson, Jeff D. Resnick, Susan M. Espeland, Mark A. |
author_facet | Casanova, Ramon Hsu, Fang-Chi Sink, Kaycee M. Rapp, Stephen R. Williamson, Jeff D. Resnick, Susan M. Espeland, Mark A. |
author_sort | Casanova, Ramon |
collection | PubMed |
description | The goal of this work is to introduce new metrics to assess risk of Alzheimer's disease (AD) which we call AD Pattern Similarity (AD-PS) scores. These metrics are the conditional probabilities modeled by large-scale regularized logistic regression. The AD-PS scores derived from structural MRI and cognitive test data were tested across different situations using data from the Alzheimer's Disease Neuroimaging Initiative (ADNI) study. The scores were computed across groups of participants stratified by cognitive status, age and functional status. Cox proportional hazards regression was used to evaluate associations with the distribution of conversion times from mild cognitive impairment to AD. The performances of classifiers developed using data from different types of brain tissue were systematically characterized across cognitive status groups. We also explored the performance of anatomical and cognitive-anatomical composite scores generated by combining the outputs of classifiers developed using different types of data. In addition, we provide the AD-PS scores performance relative to other metrics used in the field including the Spatial Pattern of Abnormalities for Recognition of Early AD (SPARE-AD) index and total hippocampal volume for the variables examined. |
format | Online Article Text |
id | pubmed-3826736 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-38267362013-11-18 Alzheimer's Disease Risk Assessment Using Large-Scale Machine Learning Methods Casanova, Ramon Hsu, Fang-Chi Sink, Kaycee M. Rapp, Stephen R. Williamson, Jeff D. Resnick, Susan M. Espeland, Mark A. PLoS One Research Article The goal of this work is to introduce new metrics to assess risk of Alzheimer's disease (AD) which we call AD Pattern Similarity (AD-PS) scores. These metrics are the conditional probabilities modeled by large-scale regularized logistic regression. The AD-PS scores derived from structural MRI and cognitive test data were tested across different situations using data from the Alzheimer's Disease Neuroimaging Initiative (ADNI) study. The scores were computed across groups of participants stratified by cognitive status, age and functional status. Cox proportional hazards regression was used to evaluate associations with the distribution of conversion times from mild cognitive impairment to AD. The performances of classifiers developed using data from different types of brain tissue were systematically characterized across cognitive status groups. We also explored the performance of anatomical and cognitive-anatomical composite scores generated by combining the outputs of classifiers developed using different types of data. In addition, we provide the AD-PS scores performance relative to other metrics used in the field including the Spatial Pattern of Abnormalities for Recognition of Early AD (SPARE-AD) index and total hippocampal volume for the variables examined. Public Library of Science 2013-11-08 /pmc/articles/PMC3826736/ /pubmed/24250789 http://dx.doi.org/10.1371/journal.pone.0077949 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. |
spellingShingle | Research Article Casanova, Ramon Hsu, Fang-Chi Sink, Kaycee M. Rapp, Stephen R. Williamson, Jeff D. Resnick, Susan M. Espeland, Mark A. Alzheimer's Disease Risk Assessment Using Large-Scale Machine Learning Methods |
title | Alzheimer's Disease Risk Assessment Using Large-Scale Machine Learning Methods |
title_full | Alzheimer's Disease Risk Assessment Using Large-Scale Machine Learning Methods |
title_fullStr | Alzheimer's Disease Risk Assessment Using Large-Scale Machine Learning Methods |
title_full_unstemmed | Alzheimer's Disease Risk Assessment Using Large-Scale Machine Learning Methods |
title_short | Alzheimer's Disease Risk Assessment Using Large-Scale Machine Learning Methods |
title_sort | alzheimer's disease risk assessment using large-scale machine learning methods |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3826736/ https://www.ncbi.nlm.nih.gov/pubmed/24250789 http://dx.doi.org/10.1371/journal.pone.0077949 |
work_keys_str_mv | AT casanovaramon alzheimersdiseaseriskassessmentusinglargescalemachinelearningmethods AT hsufangchi alzheimersdiseaseriskassessmentusinglargescalemachinelearningmethods AT sinkkayceem alzheimersdiseaseriskassessmentusinglargescalemachinelearningmethods AT rappstephenr alzheimersdiseaseriskassessmentusinglargescalemachinelearningmethods AT williamsonjeffd alzheimersdiseaseriskassessmentusinglargescalemachinelearningmethods AT resnicksusanm alzheimersdiseaseriskassessmentusinglargescalemachinelearningmethods AT espelandmarka alzheimersdiseaseriskassessmentusinglargescalemachinelearningmethods AT alzheimersdiseaseriskassessmentusinglargescalemachinelearningmethods |