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Genetic Structure in Dwarf Bamboo (Bashania fangiana) Clonal Populations with Different Genet Ages

Amplified fragment length polymorphism (AFLP) fingerprints were used to reveal genotypic diversity of dwarf bamboo (Bashania fangiana) clonal populations with two different genet ages (≤30 years versus >70 years) at Wolong National Natural Reserve, Sichuan province, China. We generated AFLP finge...

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Autores principales: Ma, Qing-qing, Song, Hui-xing, Zhou, Shi-qiang, Yang, Wan-qin, Li, De-sheng, Chen, Jin-song
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3828345/
https://www.ncbi.nlm.nih.gov/pubmed/24244360
http://dx.doi.org/10.1371/journal.pone.0078784
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author Ma, Qing-qing
Song, Hui-xing
Zhou, Shi-qiang
Yang, Wan-qin
Li, De-sheng
Chen, Jin-song
author_facet Ma, Qing-qing
Song, Hui-xing
Zhou, Shi-qiang
Yang, Wan-qin
Li, De-sheng
Chen, Jin-song
author_sort Ma, Qing-qing
collection PubMed
description Amplified fragment length polymorphism (AFLP) fingerprints were used to reveal genotypic diversity of dwarf bamboo (Bashania fangiana) clonal populations with two different genet ages (≤30 years versus >70 years) at Wolong National Natural Reserve, Sichuan province, China. We generated AFLP fingerprints for 96 leaf samples, collected at 30 m intervals in the two populations, using ten selective primer pairs. A total of 92 genotypes were identified from the both populations. The mean proportion of distinguishable genotypes (G/N) was 0.9583 (0.9375 to 0.9792) and Simpson's index of diversity (D) was 0.9982 (0.9973 to 0.9991). So, two B. fangiana populations were multiclonal and highly diverse. The largest single clone may occur over a distance of about 30 m. Our results demonstrated that the genotypic diversity and genet density of B. fangiana clonal population did not change significantly (47 versus 45) with genet aging and low partitioned genetic differentiation was between the two populations (Gst = 0.0571). The analysis of molecular variance consistently showed that a large proportion of the genetic variation (87.79%) existed among the individuals within populations, whereas only 12.21% were found among populations. In addition, the high level of genotypic diversity in the two populations implies that the further works were needed to investigate the reasons for the poor seed set in B. fangiana after flowering.
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spelling pubmed-38283452013-11-16 Genetic Structure in Dwarf Bamboo (Bashania fangiana) Clonal Populations with Different Genet Ages Ma, Qing-qing Song, Hui-xing Zhou, Shi-qiang Yang, Wan-qin Li, De-sheng Chen, Jin-song PLoS One Research Article Amplified fragment length polymorphism (AFLP) fingerprints were used to reveal genotypic diversity of dwarf bamboo (Bashania fangiana) clonal populations with two different genet ages (≤30 years versus >70 years) at Wolong National Natural Reserve, Sichuan province, China. We generated AFLP fingerprints for 96 leaf samples, collected at 30 m intervals in the two populations, using ten selective primer pairs. A total of 92 genotypes were identified from the both populations. The mean proportion of distinguishable genotypes (G/N) was 0.9583 (0.9375 to 0.9792) and Simpson's index of diversity (D) was 0.9982 (0.9973 to 0.9991). So, two B. fangiana populations were multiclonal and highly diverse. The largest single clone may occur over a distance of about 30 m. Our results demonstrated that the genotypic diversity and genet density of B. fangiana clonal population did not change significantly (47 versus 45) with genet aging and low partitioned genetic differentiation was between the two populations (Gst = 0.0571). The analysis of molecular variance consistently showed that a large proportion of the genetic variation (87.79%) existed among the individuals within populations, whereas only 12.21% were found among populations. In addition, the high level of genotypic diversity in the two populations implies that the further works were needed to investigate the reasons for the poor seed set in B. fangiana after flowering. Public Library of Science 2013-11-14 /pmc/articles/PMC3828345/ /pubmed/24244360 http://dx.doi.org/10.1371/journal.pone.0078784 Text en © 2013 Ma et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Ma, Qing-qing
Song, Hui-xing
Zhou, Shi-qiang
Yang, Wan-qin
Li, De-sheng
Chen, Jin-song
Genetic Structure in Dwarf Bamboo (Bashania fangiana) Clonal Populations with Different Genet Ages
title Genetic Structure in Dwarf Bamboo (Bashania fangiana) Clonal Populations with Different Genet Ages
title_full Genetic Structure in Dwarf Bamboo (Bashania fangiana) Clonal Populations with Different Genet Ages
title_fullStr Genetic Structure in Dwarf Bamboo (Bashania fangiana) Clonal Populations with Different Genet Ages
title_full_unstemmed Genetic Structure in Dwarf Bamboo (Bashania fangiana) Clonal Populations with Different Genet Ages
title_short Genetic Structure in Dwarf Bamboo (Bashania fangiana) Clonal Populations with Different Genet Ages
title_sort genetic structure in dwarf bamboo (bashania fangiana) clonal populations with different genet ages
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3828345/
https://www.ncbi.nlm.nih.gov/pubmed/24244360
http://dx.doi.org/10.1371/journal.pone.0078784
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