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The Transcriptomics of Secondary Growth and Wood Formation in Conifers

In the last years, forestry scientists have adapted genomics and next-generation sequencing (NGS) technologies to the search for candidate genes related to the transcriptomics of secondary growth and wood formation in several tree species. Gymnosperms, in particular, the conifers, are ecologically a...

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Autores principales: Carvalho, Ana, Paiva, Jorge, Louzada, José, Lima-Brito, José
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3830773/
https://www.ncbi.nlm.nih.gov/pubmed/24288610
http://dx.doi.org/10.1155/2013/974324
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author Carvalho, Ana
Paiva, Jorge
Louzada, José
Lima-Brito, José
author_facet Carvalho, Ana
Paiva, Jorge
Louzada, José
Lima-Brito, José
author_sort Carvalho, Ana
collection PubMed
description In the last years, forestry scientists have adapted genomics and next-generation sequencing (NGS) technologies to the search for candidate genes related to the transcriptomics of secondary growth and wood formation in several tree species. Gymnosperms, in particular, the conifers, are ecologically and economically important, namely, for the production of wood and other forestry end products. Until very recently, no whole genome sequencing of a conifer genome was available. Due to the gradual improvement of the NGS technologies and inherent bioinformatics tools, two draft assemblies of the whole genomes sequence of Picea abies and Picea glauca arose in the current year. These draft genome assemblies will bring new insights about the structure, content, and evolution of the conifer genomes. Furthermore, new directions in the forestry, breeding and research of conifers will be discussed in the following. The identification of genes associated with the xylem transcriptome and the knowledge of their regulatory mechanisms will provide less time-consuming breeding cycles and a high accuracy for the selection of traits related to wood production and quality.
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spelling pubmed-38307732013-11-28 The Transcriptomics of Secondary Growth and Wood Formation in Conifers Carvalho, Ana Paiva, Jorge Louzada, José Lima-Brito, José Mol Biol Int Review Article In the last years, forestry scientists have adapted genomics and next-generation sequencing (NGS) technologies to the search for candidate genes related to the transcriptomics of secondary growth and wood formation in several tree species. Gymnosperms, in particular, the conifers, are ecologically and economically important, namely, for the production of wood and other forestry end products. Until very recently, no whole genome sequencing of a conifer genome was available. Due to the gradual improvement of the NGS technologies and inherent bioinformatics tools, two draft assemblies of the whole genomes sequence of Picea abies and Picea glauca arose in the current year. These draft genome assemblies will bring new insights about the structure, content, and evolution of the conifer genomes. Furthermore, new directions in the forestry, breeding and research of conifers will be discussed in the following. The identification of genes associated with the xylem transcriptome and the knowledge of their regulatory mechanisms will provide less time-consuming breeding cycles and a high accuracy for the selection of traits related to wood production and quality. Hindawi Publishing Corporation 2013 2013-10-29 /pmc/articles/PMC3830773/ /pubmed/24288610 http://dx.doi.org/10.1155/2013/974324 Text en Copyright © 2013 Ana Carvalho et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review Article
Carvalho, Ana
Paiva, Jorge
Louzada, José
Lima-Brito, José
The Transcriptomics of Secondary Growth and Wood Formation in Conifers
title The Transcriptomics of Secondary Growth and Wood Formation in Conifers
title_full The Transcriptomics of Secondary Growth and Wood Formation in Conifers
title_fullStr The Transcriptomics of Secondary Growth and Wood Formation in Conifers
title_full_unstemmed The Transcriptomics of Secondary Growth and Wood Formation in Conifers
title_short The Transcriptomics of Secondary Growth and Wood Formation in Conifers
title_sort transcriptomics of secondary growth and wood formation in conifers
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3830773/
https://www.ncbi.nlm.nih.gov/pubmed/24288610
http://dx.doi.org/10.1155/2013/974324
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